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Importing *.h5 file from a ARDFtoHDF5 converter not working in PyJibe #24

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tenoriomaria opened this issue Jun 10, 2022 · 1 comment

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@tenoriomaria
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Hi,
I am working with Asylum Research AFM and PyJibe. The data I acquire are maps of force-distance curves, which are generated as *.ARDF files. I translate these files into *.h5 files to be able to read them in PyJibe, but it does not work. This is the error message:
"No AFM data files could be found in the location specified"
Thanks in advance!

@paulmueller
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Hello, HDF5 files are only supported in the afmformats file format: https://afmformats.readthedocs.io/en/stable/sec_api/afmformats.formats.fmt_hdf5.html#afmformats.formats.fmt_hdf5.load_hdf5

Which means either you convert your data into this structure or you implement a reader and create a pull request for afmformats.

@paulmueller paulmueller transferred this issue from AFM-analysis/PyJibe Jun 27, 2024
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