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69 changes: 45 additions & 24 deletions bam_masterdata/datamodel/vocabulary_types.py
Original file line number Diff line number Diff line change
Expand Up @@ -78428,67 +78428,88 @@ class OrganismFootnoteZkbs(VocabularyType):
class OrganismGroup(VocabularyType):
defs = VocabularyTypeDef(
code="ORGANISM_GROUP",
description="""Organism group assignment according to the central comission of biological safety or category in the BAM-Biomicrosearch//Organismen Gruppenzuordnung anhand ZKBS bzw. die Kategorie in der BAM-Microsearch Datenbank database//Organismen Gruppenzuordnung anhand ZKBS bzw. die Kategorie in der BAM-Microsearch Datenbank""",
description="""
Controlled vocabulary for categorizing organisms according to the central commission of biology safety or category in the BAM-Biomicrosearch.
""",
)

archaea = VocabularyTerm(
code="ARCHAEA",
label="ARCHAEA",
description="""Archaea//Archaeen""",
description="""
Single-celled prokaryotic microorganisms distinct from bacteria, often found in extreme
environments.
""",
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description="""
Single-celled microorganisms distinct from bacteria. They are prokariotes (lack a nucleus) and often found in extreme enviroments.
""",

)

bacteria = VocabularyTerm(
code="BACTERIA",
label="BACTERIA",
description="""Bacteria//Bakterien""",
description="""
Single-celled prokaryotic microorganisms that lack a nucleus and are ubiquitous in many
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description="""
Unicellular prokaryotic microorganisms found in diverse environments.
""",

habitats.
""",
)

eukaryotic_microorganisms = VocabularyTerm(
code="EUKARYOTIC_MICROORGANISMS",
label="EUKARYOTIC_MICROORGANISMS",
description="""Eukaryotic Microorganismes//Eukaryotische Mikroorganismen""",
description="""
Eukaryotic microorganisms (e.g. protists, microalgae). These are eukaryotic single-celled
(or simple multicellular) organisms. Includes protists, microalgae.
""",
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description="""
Include protozoa, algae, and microscopic fungi. They have complex cell(s) with a nucleus and organelles.
""",

)

fungi = VocabularyTerm(
code="FUNGI",
label="FUNGI",
description="""Fungi//Pilze""",
description="""
Eukaryotic organisms that include unicellular and multicellular forms and absorb nutrients
from their environment. Includes yeasts, molds.
""",
)

moths = VocabularyTerm(
code="MOTHS",
label="MOTHS",
description="""Moths//Motten""",
)

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description="""
Insects in the order Lepidoptera.
""",

other = VocabularyTerm(
code="OTHER",
label="OTHER",
description="""other Organisms//andere Organismen""",
)

termites = VocabularyTerm(
code="TERMITES",
label="TERMITES",
description="""Termites//Termiten""",
insects = VocabularyTerm(
code="INSECTS",
label="INSECTS",
description="""
Arthropods having a segmented body, three pairs of legs, typically wings and antennae.
""",
)

tse_agents = VocabularyTerm(
code="TSE-AGENTS",
label="TSE-AGENTS",
description="""TSE-Agents//TSE-Agenzien""",
description="""
Transmissible spongiform encephalopathy (TSE) agents. Infectious proteinaceous particles
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description="""
Transmissible spongiform encephalopathy (TSE) agents are prions-infectious proteins causing neurodegenaratve diseases.
""",

(prions) implicated in prion diseases.
""",
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description="""
Infectious proteins causing neurodegenerative diseases.
""",

)

viroid = VocabularyTerm(
code="VIROID",
label="VIROID",
description="""Viroids//Viroide""",
description="""
Infectious, small circular RNA molecules without a protein coat that can cause disease
in plants.
""",

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description="""
Circular RNA molecules that infect plants. They lack a protein coat and are smaller than viruses.
""",

)

virus = VocabularyTerm(
code="VIRUS",
label="VIRUS",
description="""Virus//Viren""",
description="""
Infectious agents composed of genetic material (RNA or DNA) enclosed in a protein capsid,
sometimes with an envelope, which replicate inside host cells.
""",

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description="""
Acellular entities composed of genetic material (DNA or RNA) enclosed in a protein coat. They require host cells to replicate.
""",

)

other = VocabularyTerm(
code="OTHER",
label="OTHER",
description="""
Any organism not covered by the above categories (e.g. multicellular animals, plants, etc.).
""",
)


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