Update dev stuff

Author: Antoine DECHAUME

.github/workflows/tests.yml

@@ -20,9 +20,9 @@ jobs:
         os: [ubuntu-latest, macos-latest]
         python-version: ["3.7", "3.8", "3.9", "3.10", "3.11"]
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v3
       - name: Setup Python
-        uses: actions/setup-python@v2
+        uses: actions/setup-python@v4
         with:
           python-version: ${{ matrix.python-version }}
       - name: Install tox
@@ -31,7 +31,7 @@ jobs:
         # Run tox using the version of Python in `PATH`.
         run: tox -e py-coverage
       - name: Upload coverage to Codecov
-        uses: codecov/codecov-action@v2
+        uses: codecov/codecov-action@v3
         with:
           files: ./coverage.xml
           verbose: true

.pre-commit-config.yaml

@@ -1,25 +1,26 @@
 repos:
 
 - repo: https://github.com/pre-commit/pre-commit-hooks
-  rev: v4.3.0
+  rev: v4.4.0
   hooks:
-  - id: trailing-whitespace
-  - id: end-of-file-fixer
-    exclude: LICENSES/headers
-  - id: check-added-large-files
-  - id: check-toml
-  - id: destroyed-symlinks
-  - id: check-symlinks
+    - id: trailing-whitespace
+    - id: end-of-file-fixer
+    - id: check-yaml
+    - id: check-added-large-files
+    - id: check-json
+    - id: check-toml
+    - id: destroyed-symlinks
+    - id: check-symlinks
 
 - repo: https://github.com/pre-commit/pygrep-hooks
-  rev: v1.9.0
+  rev: v1.10.0
   hooks:
     - id: rst-backticks
     - id: rst-directive-colons
     - id: rst-inline-touching-normal
 
 - repo: https://github.com/PyCQA/autoflake
-  rev: v1.7.6
+  rev: v2.0.0
   hooks:
     - id: autoflake
       args: [
@@ -50,49 +51,54 @@ repos:
       ]
 
 - repo: https://github.com/myint/docformatter
-  rev: v1.5.0
+  rev: v1.6.0.rc1
   hooks:
     - id: docformatter
       exclude: ^tests/.*$
       args: [
         --in-place,
         --wrap-summaries,
-        "88",
+        "89",
         --wrap-descriptions,
-        "88",
+        "89",
       ]
 
 - repo: https://github.com/asottile/pyupgrade
-  rev: v3.2.0
+  rev: v3.3.1
   hooks:
   - id: pyupgrade
     args: [--py37-plus]
 
 - repo: https://github.com/psf/black
-  rev: 22.10.0
+  rev: 22.12.0
   hooks:
   - id: black
 
 - repo: https://github.com/PyCQA/flake8
-  rev: 5.0.4
+  rev: 6.0.0
   hooks:
   - id: flake8
     additional_dependencies:
-      - flake8-bugbear==22.10.27
-      - flake8-docstrings==1.6.0
-      - flake8-print==4.0.0
-      - pep8-naming==0.12.1
+        - flake8-bugbear==22.12.6
+        - flake8-docstrings==1.6.0
+        - flake8-logging-format==0.9.0
+        - flake8-print==5.0.0
+        - pep8-naming==0.13.3
 
 - repo: https://github.com/pre-commit/mirrors-mypy
-  rev: v0.982
+  rev: v0.991
   hooks:
   - id: mypy
+    exclude: ^(report-conf|tests|doc)
     additional_dependencies:
       - types-dataclasses
       - types-PyYAML
+      - types-jsonschema
+      - pytest
+      - types-pytest-lazy-fixture
 
 - repo: https://github.com/Lucas-C/pre-commit-hooks
-  rev: v1.3.1
+  rev: v1.4.0
   hooks:
     - id: insert-license
       name: insert apache license

LICENSES/headers/apache.txt

@@ -13,4 +13,4 @@ Unless required by applicable law or agreed to in writing, software
 distributed under the License is distributed on an "AS IS" BASIS,
 WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
 See the License for the specific language governing permissions and
-limitations under the License.
+limitations under the License.

NOTICE

@@ -26,4 +26,4 @@ The BSD License
 The following components are provided under the BSD License
 (https://opensource.org/licenses/bsd-license.php)
 
-https://palletsprojects.com/p/jinja
+https://palletsprojects.com/p/jinja

report-conf/conf.py

@@ -197,7 +197,7 @@ def setup(app):
 # Bibliographic Dublin Core info.
 epub_title = project
 
-# The unique identifier of the text. This can be a ISBN number
+# The unique identifier of the text. This can be a ISBN.
 # or the project homepage.
 #
 # epub_identifier = ''

setup.cfg

@@ -80,26 +80,14 @@ ignore =
        E501,
 exclude = tests/data
 max-line-length = 88
-select = B,C,E,F,G,N,T,W,B950
+select = B,C,D,E,F,G,N,T,W,B950
 docstring-convention = google
+per-file-ignores =
+    conf.py:D
+    tests/**/*.py:D
 
 [mypy]
-;files = src/pytest_executable, tests
-;exclude = (tests/data|report-conf)
-python_version = 3.7
-warn_unused_configs = True
-disallow_subclassing_any = True
-disallow_any_generics = True
-disallow_untyped_calls = True
-# disallow_untyped_defs = True
-disallow_incomplete_defs = True
-# check_untyped_defs = True
-disallow_untyped_decorators = True
-no_implicit_optional = True
-warn_redundant_casts = True
-warn_unused_ignores = True
-# warn_return_any = True
-no_implicit_reexport = True
+strict = True
 
-[mypy-numpy,pytest,_pytest.*,py,setuptools,jsonschema,delta]
+[mypy-delta]
 ignore_missing_imports = True

src/pytest_executable/file_tools.py

@@ -159,19 +159,20 @@ def _shallow_dir_copy(
     """Shallow copy a directory tree.
 
     Directories are duplicated, files are symlinked. The destination directory
-    shall not exists and will be created.
+    shall not exist and will be created.
 
     Args:
         src_dir: Path to the source directory.
         dst_dir: Path to the destination directory.
+        ignored_files: Files to be ignored.
     """
     dst_dir.mkdir(parents=True, exist_ok=True)
     for src_entry in src_dir.iterdir():
         dst_entry = dst_dir / src_entry.name
         if src_entry.name in ignored_files:
             pass
         elif src_entry.is_dir():
-            # directories are not symlinked but created so we can not modify a
+            # directories are not symlinked but created such that we can not modify a
             # child file by accident
             _shallow_dir_copy(src_entry, dst_entry, ignored_files)
         else: