ci: autorelease (#72)

* feat: make deepsearch-toolkit optional

Signed-off-by: Michele Dolfi <[email protected]>

* add tqdm

Signed-off-by: Michele Dolfi <[email protected]>

* remove textcolor dependency

Signed-off-by: Michele Dolfi <[email protected]>

* ci: add automated releases

Signed-off-by: Michele Dolfi <[email protected]>

* add andromeda_nlp to exclude list

Signed-off-by: Michele Dolfi <[email protected]>

* more andromeda_ ignores

Signed-off-by: Michele Dolfi <[email protected]>

* run checks after install

Signed-off-by: Michele Dolfi <[email protected]>

* fix pylint

Signed-off-by: Michele Dolfi <[email protected]>

---------

Signed-off-by: Michele Dolfi <[email protected]>

.github/actions/setup-poetry/action.yml

@@ -0,0 +1,19 @@
+name: 'Set up Poetry and install'
+description: 'Set up a specific version of Poetry and install dependencies using caching.'
+inputs:
+  python-version:
+    description: "Version range or exact version of Python or PyPy to use, using SemVer's version range syntax."
+    default: '3.11'
+runs:
+  using: 'composite'
+  steps:
+    - name: Install poetry
+      run: pipx install poetry==1.8.3
+      shell: bash
+    - uses: actions/setup-python@v4
+      with:
+        python-version: ${{ inputs.python-version }}
+        cache: 'poetry'
+    - name: Install only dependencies and not the package itself
+      run: poetry install --all-extras --no-root
+      shell: bash

.github/scripts/release.sh

@@ -0,0 +1,39 @@
+#!/bin/bash
+
+set -e  # trigger failure on error - do not remove!
+set -x  # display command on output
+
+if [ -z "${TARGET_VERSION}" ]; then
+    >&2 echo "No TARGET_VERSION specified"
+    exit 1
+fi
+CHGLOG_FILE="${CHGLOG_FILE:-CHANGELOG.md}"
+
+# update package version
+poetry version "${TARGET_VERSION}"
+
+# collect release notes
+REL_NOTES=$(mktemp)
+poetry run semantic-release changelog --unreleased >> "${REL_NOTES}"
+
+# update changelog
+TMP_CHGLOG=$(mktemp)
+TARGET_TAG_NAME="v${TARGET_VERSION}"
+RELEASE_URL="$(gh repo view --json url -q ".url")/releases/tag/${TARGET_TAG_NAME}"
+printf "## [${TARGET_TAG_NAME}](${RELEASE_URL}) - $(date -Idate)\n\n" >> "${TMP_CHGLOG}"
+cat "${REL_NOTES}" >> "${TMP_CHGLOG}"
+if [ -f "${CHGLOG_FILE}" ]; then
+    printf "\n" | cat - "${CHGLOG_FILE}" >> "${TMP_CHGLOG}"
+fi
+mv "${TMP_CHGLOG}" "${CHGLOG_FILE}"
+
+# push changes
+git config --global user.name 'github-actions[bot]'
+git config --global user.email 'github-actions[bot]@users.noreply.github.com'
+git add pyproject.toml "${CHGLOG_FILE}"
+COMMIT_MSG="chore: bump version to ${TARGET_VERSION} [skip ci]"
+git commit -m "${COMMIT_MSG}"
+git push origin main
+
+# create GitHub release (incl. Git tag)
+gh release create "${TARGET_TAG_NAME}" -F "${REL_NOTES}"

.github/workflows/cd.yml

@@ -0,0 +1,50 @@
+name: "Run CD"
+
+on:
+  push:
+    branches:
+      - main
+
+env:
+  # disable keyring (https://github.com/actions/runner-images/issues/6185):
+  PYTHON_KEYRING_BACKEND: keyring.backends.null.Keyring
+
+jobs:
+  code-checks:
+    uses: ./.github/workflows/checks.yml
+  pre-release-check:
+    runs-on: ubuntu-latest
+    outputs:
+      TARGET_TAG_V: ${{ steps.version_check.outputs.TRGT_VERSION }}
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          fetch-depth: 0  # for fetching tags, required for semantic-release
+      - uses: ./.github/actions/setup-poetry
+      - name: Check version of potential release
+        id: version_check
+        run: |
+            TRGT_VERSION=$(poetry run semantic-release print-version)
+            echo "TRGT_VERSION=${TRGT_VERSION}" >> $GITHUB_OUTPUT
+            echo "${TRGT_VERSION}"
+      - name: Check notes of potential release
+        run: poetry run semantic-release changelog --unreleased
+  release:
+    needs: [code-checks, pre-release-check]
+    if: needs.pre-release-check.outputs.TARGET_TAG_V != ''
+    environment: auto-release
+    runs-on: ubuntu-latest
+    concurrency: release
+    steps:
+      - uses: actions/checkout@v4
+        with:
+          token: ${{ secrets.GH_PAT }}
+          fetch-depth: 0  # for fetching tags, required for semantic-release
+      - uses: ./.github/actions/setup-poetry
+      - name: Run release script
+        env:
+          GH_TOKEN: ${{ secrets.GH_PAT }}
+          TARGET_VERSION: ${{ needs.pre-release-check.outputs.TARGET_TAG_V }}
+          CHGLOG_FILE: CHANGELOG.md
+        run: ./.github/scripts/release.sh
+        shell: bash

.github/workflows/checks.yml

@@ -0,0 +1,31 @@
+on:
+  workflow_call:
+
+env:
+  CMAKE_BUILD_TYPE: Debug
+
+jobs:
+  run-checks:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ["3.8", "3.9", "3.10", "3.11", "3.12"]
+    steps:
+      - uses: actions/checkout@v4
+      # - name: Install dependencies [linux]
+      #   run: sudo apt-get install -y libldap-common
+      #   shell: bash
+      - uses: ./.github/actions/setup-poetry
+        with:
+          python-version: ${{ matrix.python-version }}
+      - name: Install with poetry
+        run: poetry install --all-extras
+      - name: Run styling check
+        run: poetry run pre-commit run --all-files
+      - name: Testing
+        run: |
+          poetry run pytest ./tests/test_structs.py -v
+          poetry run pytest ./tests/test_nlp.py -v	
+          poetry run pytest ./tests/test_glm.py -v
+      - name: Build with poetry
+        run: poetry build

.github/workflows/ci.yml

@@ -0,0 +1,24 @@
+name: "Run CI"
+
+on:
+  schedule:  # will run only on the default branch (main)
+    # Nightly build at 3:42 A.M.
+    - cron: "42 3 */1 * *"
+  pull_request:
+    types: [opened, reopened]
+  push:
+    branches:
+      - "**"
+      - "!main"
+      - "!gh-pages"
+
+env:
+  # disable keyring (https://github.com/actions/runner-images/issues/6185):
+  PYTHON_KEYRING_BACKEND: keyring.backends.null.Keyring
+
+jobs:
+  code-checks:
+    uses: ./.github/workflows/checks.yml
+  build-wheels:
+    uses: ./.github/workflows/wheels.yml
+

.github/workflows/release.yml

@@ -0,0 +1,13 @@
+name: "Build and publish package"
+
+on:
+  release:
+    types: [published]
+
+permissions:
+  contents: read
+
+jobs:
+  build-and-publish:
+    uses: ./.github/workflows/wheels.yml
+    secrets: inherit