config.example.json

{
  "auth": {
    "api_key": "test 123"
  },
  "nlp": {
    "num_workers": 2
  },
  "statsd": {
    "port": 9125
  },
  "redis_cache": {
    "url": "redis://127.0.0.1:6379/0"
  },
  "watson_health_annotator": {
    "api_url": "https://us-south.wh-acd.cloud.ibm.com/wh-acd/api",
    "api_key": "",
    "flow_name": "wh_acd.ibm_clinical_insights_v1.0_standard_flow",
    "max_attempts": 5,
    "timeout_seconds": 600,
    "concepts": {
      "umls.Organism": "",
      "umls.AminoAcidPeptideOrProtein": "",
      "umls.BiologicallyActiveSubstance": "",
      "umls.OrganicChemical": "",
      "umls.PharmacologicSubstance": "",
      "umls.NucleicAcidNucleosideOrNucleotide": "",
      "umls.GeneOrGenome": "ACE2",
      "umls.Activity": "binding, containing, ...",
      "umls.MolecularFunction": "binding, conformational changes, ...",
      "umls.Virus": "",
      "umls.GeographicArea": "China",
      "umls.ImmunologicFactor": "spike protein, integrin",
      "umls.DiseaseOrSyndrome": "common colds, SARS ...",
      "umls.Receptor": "integrin",
      "umls.PathologicFunction": "transmission, ...",
      "umls.NaturalPhenomenonOrProcess": "transmission, ...",
      "umls.NeoplasticProcess": "",
      "icd10Code": ""
    }
  }
}