ci.yml

on:
  workflow_call:
    inputs:
      PYTHON_VERSION:
        required: true
        type: string

jobs:
  test:
    name: Build distribution and run tests
    runs-on: ubuntu-latest

    steps:
      - uses: actions/checkout@v4
      - name: Use Python ${{ inputs.PYTHON_VERSION }}
        uses: actions/setup-python@v5
        with:
          python-version: ${{ inputs.PYTHON_VERSION }}

      - name: Get pre-built package
        uses: actions/download-artifact@v4
        with:
          name: python-package-distributions
          path: dist/

      - name: Checkout sources
        inputs:
          archiveFilePatterns: "dist/package/repo-source.tar.gz"
          destinationFolder: "./src"

      - name: Install package
        run: |
          set -eux
          pip install -r "./src/requirements_dev.txt"
          pip install "./src"

      - name: Set up test database
        run: |
          set -eu
          cat >~/.my.cnf <<EOF
          [client]
          user=root
          host=127.0.0.1
          password=mysql_root_pwd
          database=ispybtest
          EOF
      
          cp "./src/conf/config.example.cfg" "./src/conf/config.cfg"
          cp "./src/conf/ws_config.example.cfg" "./src/conf/ws_config.cfg"
      
          mkdir schema
          cd schema
          tar xfz "dist/package/ispyb-database.tar.gz"
      
          printf 'Waiting for MySQL database to accept connections'
          until mysql -e "SHOW DATABASES" >/dev/null; do printf '.'; sleep 0.5; done
          printf '\n'
      
          mysql -e "SET GLOBAL log_bin_trust_function_creators = 1;"
          for f in schemas/ispyb/tables.sql \
                   schemas/ispyb/lookups.sql \
                   schemas/ispyb/data.sql \
                   schemas/ispyb/routines.sql \
                   grants/ispyb_processing.sql \
                   grants/ispyb_import.sql; do
              echo Importing ${f}...
              mysql < $f
          done
          mysql -e "CREATE USER ispyb_api@'%' IDENTIFIED BY 'password_1234'; GRANT ispyb_processing to ispyb_api@'%'; GRANT ispyb_import to ispyb_api@'%'; SET DEFAULT ROLE ispyb_processing FOR ispyb_api@'%';"
          mysql -e "CREATE USER ispyb_api_future@'%' IDENTIFIED BY 'password_4321'; GRANT SELECT ON ispybtest.* to ispyb_api_future@'%';"
          mysql -e "CREATE USER ispyb_api_sqlalchemy@'%' IDENTIFIED BY 'password_5678'; GRANT SELECT ON ispybtest.* to ispyb_api_sqlalchemy@'%'; GRANT INSERT ON ispybtest.* to ispyb_api_sqlalchemy@'%'; GRANT UPDATE ON ispybtest.* to ispyb_api_sqlalchemy@'%';"
          rm ~/.my.cnf

      - name: Run tests
        run: |
          export ISPYB_CREDENTIALS="./src/conf/config.cfg"
          PYTHONDEVMODE=1 pytest tests -ra --cov=ispyb --cov-report=xml --cov-branch

      - name: Publish coverage stats
        run: bash <(curl -s https://codecov.io/bash) -n "Python ${{ inputs.PYTHON_VERSION }}"
        continue-on-error: true
        working-directory: ./src
        timeout-inutes: 2