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Pull requests: Ensembl/ensembl-variation

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13 Open 1,119 Closed
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Pull requests list

Update VCF-only species for EVA release 6
#1132 opened Nov 18, 2024 by nakib103 Loading…
@jamie-m-a
Fix method codon() in TranscriptVariationAllele
#1131 opened Nov 11, 2024 by dglemos Loading…
@likhitha-surapaneni
optimising for human
#1130 opened Nov 8, 2024 by jamie-m-a Loading…
@nakib103
Update regulation pipeline e115
#1129 opened Oct 31, 2024 by dglemos Loading…
Use dbNSFP 4.9 academic version in Protein Function pipeline
#1127 opened Oct 29, 2024 by nakib103 Loading…
@jamie-m-a
Update ClinVar script to import somatic classifications + patch db schema 115 e115
#1117 opened Aug 19, 2024 by dglemos Loading…
6 tasks done
@nakib103
Remove redundant symbolic alt to so term hash e114
#1075 opened Mar 21, 2024 by nakib103 Loading…
@dglemos
13
Web VEP: fix incorrect variant end on hold
#1059 opened Nov 30, 2023 by nuno-agostinho • Draft
@nakib103
5
Update dbSNP script - fix MAF
#1052 opened Nov 7, 2023 by dglemos Loading…
@jamie-m-a @olaaustine
Adding check for population sets for variation sets script
#1020 opened Jul 26, 2023 by olaaustine Loading…
@sarahhunt @jamie-m-a
6
Update SpliceAI GPU
#983 opened Apr 6, 2023 by dglemos Loading…
@likhitha-surapaneni
Prevent start_lost check when shifting out of translateable region bug
#616 opened Jul 6, 2020 by aparton Loading…
@sarahhunt @likhitha-surapaneni
2
Return subseq from correct side of seq when on reverse strand using a… on hold
#454 opened Sep 13, 2019 by aparton Loading…
@nakib103
1
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