.travis.yml

os: "linux"

language: "perl"
perl:
  - "5.10"
  - "5.14"
  - "5.18"
  - "5.22"
  - "5.26"

env:
  jobs:
    COVERALLS: true
    DB: mysql
  global:
    secure: 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

dist: trusty
group: deprecated

addons:
  apt:
    packages:
      - unzip
      - mysql-server-5.6
      - apache2
      - libmysqlclient-dev
      - libpng12-dev
      - libssl-dev
      - openssl
      - mysql-client-5.6
      - mysql-client-core-5.6

before_install:
  - export ENSEMBL_BRANCH=release/113
  - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-test.git
  - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl.git
  - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-io.git
  - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-funcgen.git
  - git clone --branch $ENSEMBL_BRANCH --depth 1 https://github.com/Ensembl/ensembl-variation.git

  - export CWD=$PWD
  - export DEPS=$HOME/dependencies
  - mkdir -p $DEPS
  - cd $DEPS
  - $CWD/travisci/get_dependencies.sh
  - cd $CWD

install:
  - export CWD=$PWD
  - export DEPS=$HOME/dependencies
  - export KENT_SRC="$DEPS/kent-335_base/src"
  - export HTSLIB_DIR="$DEPS/htslib"
  - export MACHTYPE=$(uname -m)
  - export CFLAGS="-fPIC"
  - export PERL5LIB=$DEPS/bioperl-live:$PERL5LIB
  - cd $DEPS
  - $CWD/travisci/build_c.sh
  - cd $CWD
  - $CWD/travisci/install_dependencies.sh
  - cp travisci/MultiTestDB.conf.travisci  t/MultiTestDB.conf

script: "./travisci/harness.sh"

jobs:
  include:
    - stage: trigger_dependent_builds
      script: ./travisci/trigger-dependent-build.sh
      perl: "5.14"

notifications:
  email:
    on_success: always
    on_failure: always