Enhancement of `include` configuration

[MukjepScarlet]

1. Add an option to include transitive dependencies. For example, include(A) while A depends on B and C, then jar of A & B & C are included.
2. Auto exclude include dependencies if we have an exactly same one in modImplementation/modApi or the game itself. For example, 1.21.7 has Gson 2.11.0, if we include it (same version), then it should be excluded and a warning should be logged.
3. Also warn for outdated dependencies. For example, when I include Gson in a 1.21.7 mod but with version 2.8.9, it should show that the game has a newer version.
4. Use full name for jar files in include. Two different libs provided by different organizations might have same name but different Maven location. Use org.example:example:api-0.1.0.jar instead of api-0.1.0.jar might be better.