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Follow up from #3132
In the PDB standard a CRYST1 from a non-crystallographic system is set to [1,1,1,90,90,90], in those cases we set dimensions to None. For the PDBQT reader we just read whatever is in CRYST1, we should check if the same behaviour as the PDB reader needs to be follow here. See: https://github.com/MDAnalysis/mdanalysis/pull/3132/files#r628898514
Additional task:
- Add coverage to
convert_pos_from_native, see: https://github.com/MDAnalysis/mdanalysis/pull/3132/files#r629699881