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Updated conditional statement for fastsurfer container
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functions/01_proc-surf.sh

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@@ -130,7 +130,7 @@ elif [[ "$surfdir" == "FALSE" ]]; then ((N++))
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Note "PROC" "$PROC"
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if [[ "$recon" == "fastsurfer" ]]; then
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Do_cmd mkdir -p "${dir_surf}/${idBIDS}"
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if [[ ${PROC} == "container_micapipe-v0.2.0" ]]; then
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if [[ ${PROC} == "container_micapipe-v0.2.2" ]]; then
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Info "FastSurfer: running fastsurfer_cpu environment"
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source activate fastsurfer_cpu
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Note "conda" "$(conda info --env | grep '*' | awk -F '*' '{print $2}')"

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