diff --git a/bin/agat_sp_filter_feature_by_attribute_presence.pl b/bin/agat_sp_filter_feature_by_attribute_presence.pl index 0f3c3c3f..431c8aa2 100755 --- a/bin/agat_sp_filter_feature_by_attribute_presence.pl +++ b/bin/agat_sp_filter_feature_by_attribute_presence.pl @@ -279,7 +279,7 @@ sub should_we_remove_feature{ =head1 NAME -agat_sp_select_feature_by_attribute_presence.pl +agat_sp_filter_feature_by_attribute_presence.pl =head1 DESCRIPTION @@ -291,8 +291,8 @@ =head1 DESCRIPTION =head1 SYNOPSIS - agat_sp_select_feature_by_attribute_presence.pl --gff infile.gff -a [ --output outfile ] - agat_sp_select_feature_by_attribute_presence.pl --help + agat_sp_filter_feature_by_attribute_presence.pl --gff infile.gff -a [ --output outfile ] + agat_sp_filter_feature_by_attribute_presence.pl --help =head1 OPTIONS diff --git a/bin/agat_sp_manage_attributes.pl b/bin/agat_sp_manage_attributes.pl index 7b74371f..b15dc1b4 100755 --- a/bin/agat_sp_manage_attributes.pl +++ b/bin/agat_sp_manage_attributes.pl @@ -310,7 +310,7 @@ =head1 OPTIONS =item B<--cp> -When tags specied are with this form: tagName/newTagName. +Bolean. When tags specied are with this form: tagName/newTagName. By using this parameter, the attribute with the tag tagName will be duplicated with the new tag newTagName if no attribute with the tag newTagName already exits. diff --git a/docs/tools/agat_sp_filter_feature_by_attribute_presence.md b/docs/tools/agat_sp_filter_feature_by_attribute_presence.md index 15c73389..83b0658c 100644 --- a/docs/tools/agat_sp_filter_feature_by_attribute_presence.md +++ b/docs/tools/agat_sp_filter_feature_by_attribute_presence.md @@ -1,4 +1,4 @@ -# agat\_sp\_select\_feature\_by\_attribute\_presence.pl +# agat\_sp\filter\_feature\_by\_attribute\_presence.pl ## DESCRIPTION @@ -11,8 +11,8 @@ removing all children of a feature will automatically remove this feature too. ## SYNOPSIS ``` -agat_sp_select_feature_by_attribute_presence.pl --gff infile.gff -a [ --output outfile ] -agat_sp_select_feature_by_attribute_presence.pl --help +agat_sp_filter_feature_by_attribute_presence.pl --gff infile.gff -a [ --output outfile ] +agat_sp_filter_feature_by_attribute_presence.pl --help ``` ## OPTIONS diff --git a/docs/tools/agat_sp_manage_attributes.md b/docs/tools/agat_sp_manage_attributes.md index 54a048bf..bc4bf21b 100644 --- a/docs/tools/agat_sp_manage_attributes.md +++ b/docs/tools/agat_sp_manage_attributes.md @@ -42,7 +42,7 @@ agat_sp_manage_attributes.pl --help - **--cp** - When tags specied are with this form: tagName/newTagName. + Bolean. When tags specied are with this form: tagName/newTagName. By using this <cp> parameter, the attribute with the tag tagName will be duplicated with the new tag newTagName if no attribute with the tag newTagName already exits.