diff --git a/materials/sections/provenance-reproducibility-datapaper.qmd b/materials/sections/provenance-reproducibility-datapaper.qmd index e89b09a3..6068d97f 100644 --- a/materials/sections/provenance-reproducibility-datapaper.qmd +++ b/materials/sections/provenance-reproducibility-datapaper.qmd @@ -4,10 +4,14 @@ - Learn how to use R to package your work by building a reproducible paper in RMarkdown/Quarto - Introduce tools and techniques for reproducibility supported by the NCEAS and DataONE + + + ### Reproducible Research: Recap Working in a reproducible manner: @@ -211,6 +215,28 @@ What if I want a template from another journal, different from the Journal of Ar The [`rticles`](https://github.com/rstudio/rticles%20B) package provides a lot of other great templates for formatting your paper specifically to the requirements of many journals. In addition to a custom CSL file for reference customization, `rticles` supports custom LATeX templates that fit the formatting requirements of each journals. +:::callout-important +## Tinytex and rendering to PDF +To be able to render your document to PDF you need to have `tinytex` installed in your machine. + +In the console run: + + +```{r} +#| eval: false +#| +install.packages('tinytex') ## this package is already installed in our server + +tinytex::install_tinytex() ## this may take several minutes + +``` + + + +::: + + + ::: callout-tip ## Set up diff --git a/materials/session_20.qmd b/materials/session_20.qmd index b979b592..64f53fc5 100644 --- a/materials/session_20.qmd +++ b/materials/session_20.qmd @@ -3,4 +3,7 @@ title: "Reproducibility & Provenance" title-block-banner: true --- + + + {{< include /sections/provenance-reproducibility-datapaper.qmd >}} \ No newline at end of file