-
Notifications
You must be signed in to change notification settings - Fork 137
122 lines (119 loc) · 3.81 KB
/
ci.yml
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
name: ci
on:
push:
branches:
- "master"
- "test-me/*"
pull_request:
schedule:
- cron: "0 7 * * 1" # Run every Monday at 7:00 UTC
concurrency:
group: branch-${{ github.head_ref }}
cancel-in-progress: true
defaults:
run:
shell: bash -el {0}
jobs:
unit-test:
name: "py${{ matrix.python-version }} | ${{ matrix.os }} | unit tests"
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
matrix:
os: [macos, ubuntu, windows]
python-version: ["3.12"]
include:
- os: ubuntu
python-version: "3.10"
- os: ubuntu
python-version: "3.11"
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Conda and parcels
uses: ./.github/actions/install-parcels
with:
environment-file: environment.yml
python-version: ${{ matrix.python-version }}
- name: Unit test
run: |
coverage run -m pytest -v -s --html=${{ matrix.os }}_${{ matrix.python-version }}_unit_test_report.html --self-contained-html tests
coverage xml
- name: Codecov
uses: codecov/[email protected]
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
if: matrix.python-version == '3.12'
with:
flags: unit-tests
- name: Upload test results
if: ${{ always() }} # Always run this step, even if tests fail
uses: actions/upload-artifact@v4
with:
name: Unittest report ${{ matrix.os }}-${{ matrix.python-version }}
path: ${{ matrix.os }}_${{ matrix.python-version }}_unit_test_report.html
integration-test:
name: "py${{ matrix.python-version }} | ${{ matrix.os }} | integration tests"
runs-on: ${{ matrix.os }}-latest
strategy:
fail-fast: false
matrix:
os: [macos, ubuntu, windows]
python-version: ["3.12"]
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Conda and parcels
uses: ./.github/actions/install-parcels
with:
environment-file: environment.yml
- name: Integration test
run: |
coverage run -m pytest -v -s --nbval-lax -k "not documentation" --html="${{ matrix.os }}_integration_test_report.html" --self-contained-html docs/examples
coverage xml
- name: Codecov
uses: codecov/[email protected]
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
with:
flags: integration-tests
- name: Upload test results
if: ${{ always() }} # Always run this step, even if tests fail
uses: actions/upload-artifact@v4
with:
name: Integration test report ${{ matrix.os }}
path: ${{ matrix.os }}_integration_test_report.html
merge-test-artifacts:
runs-on: ubuntu-latest
needs:
- unit-test
- integration-test
steps:
- name: Merge Artifacts
uses: actions/upload-artifact/merge@v4
with:
name: Testing reports
pattern: "* report *"
typechecking:
name: mypy
runs-on: ubuntu-latest
steps:
- name: Checkout
uses: actions/checkout@v4
- name: Setup Conda and parcels
uses: ./.github/actions/install-parcels
with:
environment-file: environment.yml
- run: conda install lxml # dep for report generation
- name: Typechecking
run: |
mypy --install-types --non-interactive parcels --cobertura-xml-report mypy_report
- name: Upload mypy coverage to Codecov
uses: codecov/[email protected]
if: ${{ always() }} # Upload even on error of mypy
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
with:
file: mypy_report/cobertura.xml
flags: mypy
fail_ci_if_error: false