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DESCRIPTION
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DESCRIPTION
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Package: AnnotationDbi
Title: Manipulation of SQLite-based annotations in Bioconductor
Description: Implements a user-friendly interface for querying SQLite-based annotation data packages.
biocViews: Annotation, Microarray, Sequencing, GenomeAnnotation
URL: https://bioconductor.org/packages/AnnotationDbi
Video: https://www.youtube.com/watch?v=8qvGNTVz3Ik
BugReports: https://github.com/Bioconductor/AnnotationDbi/issues
Version: 1.65.2
License: Artistic-2.0
Encoding: UTF-8
Author: Hervé Pagès, Marc Carlson, Seth Falcon, Nianhua Li
Maintainer: Bioconductor Package Maintainer <[email protected]>
Depends: R (>= 2.7.0), methods, stats4, BiocGenerics (>= 0.29.2),
Biobase (>= 1.17.0), IRanges
Imports: DBI, RSQLite, S4Vectors (>= 0.9.25), stats, KEGGREST
Suggests: utils, hgu95av2.db, GO.db, org.Sc.sgd.db, org.At.tair.db,
RUnit, TxDb.Hsapiens.UCSC.hg19.knownGene,
org.Hs.eg.db, reactome.db, AnnotationForge, graph,
EnsDb.Hsapiens.v75, BiocStyle, knitr
VignetteBuilder: knitr
Collate: 00RTobjs.R AllGenerics.R AllClasses.R
unlist2.R utils.R SQL.R FlatBimap.R
AnnDbObj-lowAPI.R Bimap.R GOTerms.R BimapFormatting.R
Bimap-envirAPI.R flatten.R methods-AnnotationDb.R
methods-SQLiteConnection.R
methods-geneCentricDbs.R methods-geneCentricDbs-keys.R
methods-ReactomeDb.R methods-OrthologyDb.R
loadDb.R createAnnObjs-utils.R createAnnObjs.NCBIORG_DBs.R
createAnnObjs.NCBICHIP_DBs.R createAnnObjs.ORGANISM_DB.R
createAnnObjs.YEASTCHIP_DB.R createAnnObjs.COELICOLOR_DB.R
createAnnObjs.ARABIDOPSISCHIP_DB.R createAnnObjs.MALARIA_DB.R
createAnnObjs.YEAST_DB.R createAnnObjs.YEASTNCBI_DB.R
createAnnObjs.ARABIDOPSIS_DB.R createAnnObjs.GO_DB.R
createAnnObjs.KEGG_DB.R
createAnnObjs.PFAM_DB.R AnnDbPkg-templates-common.R
AnnDbPkg-checker.R print.probetable.R makeMap.R inpIDMapper.R
test_AnnotationDbi_package.R