Running local files through trimmomatic fails if file does not end with ".fastq" (e.g. ."fq") #280
Description
Description of the bug
Line 36 in the trimmomatic file casues failure if files do not end with .fastq e.g. .fq. This is only a testing line, and does not influence the rest of the module. It should just be removed in the next version.
echo "#TRACE fastq_lines=`cat *.fastq | wc -l`"
Command used and terminal output
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Relevant files
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System information
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