Home

Getting Started

• Installation and setup guide
• Introduction to PyCharm, Git and GitHub
• Azure Batch
• Setting up custom test run configurations

General Guidance

• Checklist for Developing a Disease Module
• Notes on Conventions Used in Design of Disease Modules
• Implementing a disease module
• Things to do before submitting a pull request for a new disease module

Help On Key Utility Modules

• Using the LinearModel helper class
• Structured logging
• The Symptom Manager
• The Diagnostic Tests Manager
• Declaring Causes of Death
• Using Consumables
• In-patient Bed-days

Coding Tips

• Checking numbers of deaths for calibration
• Template for Running Model
• Template for a standard local model run
• Working with Dataframes in Pandas
• Cookbook