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setup.py
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"""
PyPI pip package following the material by Stephen Hudson found here:
https://betterscientificsoftware.github.io/python-for-hpc/tutorials/python-pypi-packaging/
with release download_url explanation from Joel Barmettler:
https://medium.com/@joel.barmettler/how-to-upload-your-python-package-to-pypi-65edc5fe9c56
"""
from setuptools import setup, find_packages
setup(
name='opqua',
version='v1.0.2',
description='An epidemiological modeling framework for population ' \
+ 'genetics and evolution.',
long_description='Opqua is an epidemiological modeling framework for ' \
+ 'population genetics and evolution. Opqua stochastically simulates ' \
+ ' pathogens with specific, evolving genotypes spread through ' \
+ ' populations of hosts that can have specific immune profiles. \n\n' \
+ 'Opqua is a useful tool to test out scenarios, explore hypotheses, ' \
+ 'and make predictions about the relationship between pathogen ' \
+ 'evolution and epidemiology. \n\n Visit ' \
+ 'github.com/pablocarderam/opqua for more information.',
url='https://github.com/pablocarderam/opqua',
download_url='https://github.com/pablocarderam/opqua/archive/v1.0.2.tar.gz',
author='Pablo Cardenas',
author_email='[email protected]',
keywords=['epidemiology','evolution','biology'],
license='MIT',
packages=find_packages(),
install_requires=['joblib',
'textdistance',
'numpy',
'pandas',
'scipy',
'matplotlib',
'seaborn',
],
classifiers=[
'Development Status :: 3 - Alpha',
'Intended Audience :: Science/Research',
'License :: OSI Approved :: MIT License',
'Operating System :: POSIX :: Linux',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.4',
'Programming Language :: Python :: 3.5',
],
python_requires='>=3.6',
)