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env.yaml
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name: hotspot_propensity_env
channels:
- bbglab
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=main
- appdirs=1.4.4=pyh9f0ad1d_0
- bedtools=2.30.0=hc088bd4_0
- bgconfig=0.10=py36_0
- bgdata=2.0.3=py_0
- bgparsers=0.9=py36h39e3cac_0
- bgreference=0.6=py36_0
- blas=1.0=mkl
- brotlipy=0.7.0=py36he6145b8_1001
- bzip2=1.0.8=h516909a_3
- c-ares=1.11.0=h470a237_1
- ca-certificates=2023.08.22=h06a4308_0
- certifi=2021.5.30=py36h06a4308_0
- cffi=1.14.6=py36h400218f_0
- charset-normalizer=2.1.1=pyhd8ed1ab_0
- click=7.1.1=py_0
- configobj=5.0.8=pyhd8ed1ab_0
- cryptography=35.0.0=py36hb60f036_0
- curl=7.71.1=he644dc0_8
- cycler=0.11.0=pyhd3eb1b0_0
- dbus=1.13.18=hb2f20db_0
- expat=2.4.4=h295c915_0
- fontconfig=2.13.1=h6c09931_0
- freetype=2.11.0=h70c0345_0
- glib=2.69.1=h4ff587b_1
- gst-plugins-base=1.14.0=h8213a91_2
- gstreamer=1.14.0=h28cd5cc_2
- homura=0.1.3=py36_0
- humanize=4.0.0=pyhd8ed1ab_0
- icu=58.2=he6710b0_3
- idna=3.6=pyhd8ed1ab_0
- intel-openmp=2020.2=254
- jpeg=9e=h7f8727e_0
- kiwisolver=1.3.1=py36h2531618_0
- krb5=1.17.2=h926e7f8_0
- ld_impl_linux-64=2.38=h1181459_1
- libcurl=7.71.1=hcdd3856_8
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.3=he6710b0_2
- libgcc-ng=9.1.0=hdf63c60_0
- libgfortran-ng=7.3.0=hdf63c60_0
- libnghttp2=1.41.0=hab1572f_1
- libpng=1.6.37=hbc83047_0
- libssh2=1.9.0=hab1572f_5
- libstdcxx-ng=9.1.0=hdf63c60_0
- libuuid=1.0.3=h7f8727e_2
- libxcb=1.15=h7f8727e_0
- libxml2=2.9.14=h74e7548_0
- mkl=2020.2=256
- mkl-service=2.3.0=py36he8ac12f_0
- mkl_fft=1.3.0=py36h54f3939_0
- mkl_random=1.1.1=py36h0573a6f_0
- ncurses=6.3=h7f8727e_2
- numpy=1.19.2=py36h54aff64_0
- numpy-base=1.19.2=py36hfa32c7d_0
- openssl=1.1.1w=h7f8727e_0
- pandas=1.0.3=py36h0573a6f_0
- patsy=0.5.1=py36_0
- pcre=8.45=h295c915_0
- pickleshare=0.7.5=py36_0
- pip=21.2.2=py36h06a4308_0
- pybedtools=0.8.1=py36h7f0b59b_1
- pybigwig=0.3.17=py36hc013797_0
- pycparser=2.21=pyhd8ed1ab_0
- pycurl=7.43.0.6=py36h5be270d_0
- pyliftover=0.4=py_0
- pyopenssl=22.0.0=pyhd8ed1ab_1
- pyparsing=3.0.4=pyhd3eb1b0_0
- pyqt=5.9.2=py36h05f1152_2
- pysam=0.15.3=py36hda2845c_1
- pysocks=1.7.1=py36h5fab9bb_3
- python=3.6.13=h12debd9_1
- python-dateutil=2.8.2=pyhd3eb1b0_0
- python_abi=3.6=2_cp36m
- pytz=2021.3=pyhd3eb1b0_0
- qt=5.9.7=h5867ecd_1
- readline=8.1.2=h7f8727e_1
- requests=2.28.1=pyhd8ed1ab_0
- scipy=1.5.2=py36h0b6359f_0
- seaborn=0.10.1=py_0
- setuptools=58.0.4=py36h06a4308_0
- sip=4.19.8=py36hf484d3e_0
- six=1.16.0=pyhd3eb1b0_1
- sortedcontainers=2.4.0=pyhd8ed1ab_0
- sqlite=3.38.5=hc218d9a_0
- statsmodels=0.11.1=py36h7b6447c_0
- tk=8.6.12=h1ccaba5_0
- tornado=6.1=py36h27cfd23_0
- tqdm=4.44.1=py_0
- urllib3=1.26.15=pyhd8ed1ab_0
- wheel=0.37.1=pyhd3eb1b0_0
- xz=5.2.5=h7f8727e_1
- zlib=1.2.12=h7f8727e_2
- pip:
- backcall==0.2.0
- dataclasses==0.8
- decorator==5.1.1
- entrypoints==0.4
- future==0.18.3
- intervaltree==3.1.0
- ipykernel==5.5.6
- ipython==7.16.3
- ipython-genutils==0.2.0
- jedi==0.17.2
- joblib==1.1.1
- jupyter-client==7.1.2
- jupyter-core==4.9.2
- matplotlib==3.3.4
- nest-asyncio==1.5.8
- nimfa==1.4.0
- parso==0.7.1
- pexpect==4.8.0
- pillow==8.4.0
- prompt-toolkit==3.0.36
- psutil==5.9.6
- ptyprocess==0.7.0
- pygments==2.14.0
- pypdf2==3.0.1
- pyzmq==25.1.1
- reportlab==3.6.8
- scikit-learn==0.24.2
- sigprofilerextractor==1.1.0
- sigprofilermatrixgenerator==1.1.26
- sigprofilerplotting==1.3.2
- sklearn==0.0
- threadpoolctl==3.1.0
- torch==1.5.1
- traitlets==4.3.3
- typing-extensions==4.1.1
- wcwidth==0.2.8
- xlrd==1.2.0