_bookdown.yml

bibliography: ["bibliography.bib"]
citation_package: biblatex
biblio-style: "apa6"
link-citations: true
# cover-image: "media/keepcalm.png"
book_filename: "Just enough R"
new_session: yes
before_chapter_script: set_chunk_options.R
output_dir: "docs"
delete_merged_file: true
rmd_files:

  [
    # GETTING STARTED
    "index.Rmd",
    "start_here.Rmd",
    "packages.Rmd",

    # PART DATA
    "DATASETS.Rmd",
    "working-with-dataframes.Rmd",

    "real-data.Rmd",
    "import-export.Rmd",
    "column-types-and-missing.Rmd",
    "tidy-data.Rmd",
    "reshaping.Rmd",
    "summarising-data.Rmd",
"fancy-reshaping.Rmd",


"graphics.Rmd",
"graphics-ggplot-extras.Rmd",

# "example.datasets.Rmd",


# PART MODELS
"MODELS.Rmd",
"basic-statistics.Rmd",
"non-parametrics.Rmd",
"crosstabulation.Rmd",
"correlations.Rmd",
"t-tests.Rmd",
"linear-models.Rmd",
"anova.Rmd",
"generalized-linear-models.Rmd",
"multilevel-models.Rmd",
"mediation-and-covariance-models.Rmd",
"cfa-sem.Rmd",

# "additional-stubs.Rmd",
"bayes-mcmc.Rmd",
"power-analysis.Rmd",

# PART Patterns
"PATTERNS.Rmd",
"interactions.Rmd",
"predictions-and-margins.Rmd",
"models-are-data.Rmd",
"simplifying-and-reusing.Rmd",
"making-table-1.Rmd",
"quirks.Rmd",
    "string-handling.Rmd",
    "colours.Rmd",

"help.Rmd",


# PART explanations
"EXPLANATIONS.Rmd",
"confidence-and-intervals.Rmd",
"multiple-comparisons.Rmd",
"clustering.Rmd",
"fixed-or-random.Rmd",
"scaling-predictors.Rmd",
"link-functions.Rmd",
"over-fitting.Rmd",






# "sharing-and-publishing.Rmd",
# "writing-a-paper.Rmd",
# "cleaning-up-your-mess.Rmd",



"references.Rmd"
  ]