MoRP

Python implementation of Median of Ratio's normalisation method.

Props to:

Anders, S. and Huber, W. (2010) ‘Differential expression analysis for sequence count data’, GENOME BIOLOGY, 11(10). doi: 10.1186/gb-2010-11-10-r106.

Josh Starmer - https://www.youtube.com/watch?v=UFB993xufUU

Use it!

Clone it somewhere, navigate to root directory.
Install it pip install .
from morp import morp
normalised = morp.MORP(your_counts_matrix) Note: Rows = Genes, Columns = Samples.
normalised.mor for normalised counts. normalised.gm for geometric means used in calculation.