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Merge master, fix unrelated VDS-making breakage [VS-1777] #5961

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Merge master, fix unrelated VDS-making breakage [VS-1777]

Merge master, fix unrelated VDS-making breakage [VS-1777] #5961

Triggered via pull request December 5, 2025 23:08
@mcovarrmcovarr
synchronize #9302
vs_1777_build_failure
Status Success
Total duration 44m 52s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
4s
check if the environment has privileges
build and push gatk docker to artifacts
13m 8s
build and push gatk docker to artifacts
Validate script WDLs using womtools
3m 15s
Validate script WDLs using womtools
Validate generated WDLs using womtools
14m 35s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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9 errors
WDL test RUN_CNV_SOMATIC_WDL on cromwell
Process completed with exit code 1.
WDL test RUN_CNV_GERMLINE_COHORT_WDL on cromwell
Process completed with exit code 1.
unit build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
cloud build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
conda test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
variantcalling test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage
2.29 GB
sha256:56b4032887996b67f8a0fa3053105abd0f90d91a03e7013c6aaeb7cc3cc4345f
test-results-17.0.6+10-cloud
86.9 KB
sha256:a95fa861e0cb464d425fd29b0fb9e4d10965fea7512e9af6bef6a0f6f545427c
test-results-17.0.6+10-integration
579 KB
sha256:6ac86a6f99e0180729cde8c9531ada2cb4bbcb0d84414fc14634da988a68ecf2
test-results-17.0.6+10-unit
5.15 MB
sha256:f75c20769413c1375f3c9bdc0c68ea5a2d5f4d4709a7a936362a6ad8da9a44ee
test-results-docker-17.0.6+10-conda
59.5 KB
sha256:b625781aa27cfd6976caf594134e9c64352c5c3cbdee5a63f4578fb8fc9b53ed
test-results-docker-17.0.6+10-integration
582 KB
sha256:174f23796edab917fc6e26056f0850380f183f1198b213a17e92bb210961920e
test-results-docker-17.0.6+10-unit
5.01 MB
sha256:aeaf5a55f739d29384041215c4619aefbaf7551b3030a776209b8d96930da791
test-results-docker-17.0.6+10-variantcalling
31.7 KB
sha256:bc27d94d363ba2badf7dca120929a8062090bd595a6e55af11ed3723ec7df103