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Merge master, fix unrelated VDS-making breakage [VS-1777] #5984

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Merge master, fix unrelated VDS-making breakage [VS-1777]

Merge master, fix unrelated VDS-making breakage [VS-1777] #5984

Triggered via pull request December 9, 2025 17:41
@mcovarrmcovarr
synchronize #9302
vs_1777_build_failure
Status Success
Total duration 46m 12s
Artifacts 8

gatk-tests.yml

on: pull_request
check if the environment has privileges
2s
check if the environment has privileges
build and push gatk docker to artifacts
13m 46s
build and push gatk docker to artifacts
Validate script WDLs using womtools
2m 41s
Validate script WDLs using womtools
Validate generated WDLs using womtools
15m 0s
Validate generated WDLs using womtools
Matrix: wdlTests
Matrix: test
Matrix: testOnDocker
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8 errors
WDL test RUN_VCF_SITE_LEVEL_FILTERING_WDL on cromwell
Process completed with exit code 1.
cloud build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration build and test Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
unit test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
conda test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
variantcalling test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth
integration test on docker Java 17.0.6+10
The v0 series of google-github-actions/auth is no longer maintained. It will not receive updates, improvements, or security patches. Please upgrade to the latest supported versions: https://github.com/google-github-actions/auth

Artifacts

Produced during runtime
Name Size Digest
gatkDockerImage
2.29 GB
sha256:0286c14effc0a7547222b8b2fac4fc99b8cd5709a95cc3b3acff2b5e0f3551c7
test-results-17.0.6+10-cloud
86.8 KB
sha256:2635b61428338acee4a8c15ef92ff49c5781714817f3dec31f8292449fd264f9
test-results-17.0.6+10-integration
578 KB
sha256:7258391435f274d9a3dd819e05aecc4be86c9e2de5afbf5ed49bd226619f4c38
test-results-17.0.6+10-unit
5.15 MB
sha256:ae04f977649ff0d6fb41534936bdb54e4d2debe7d82f96eeae6ebd765b950086
test-results-docker-17.0.6+10-conda
59.5 KB
sha256:b301264e747bc315becbca542627b94858647e7110ff4851f1dcef7b7f69a579
test-results-docker-17.0.6+10-integration
582 KB
sha256:cd9ed7fd8353db169024370ffe609cd631161053ef4daecb47a47f1971fa51a0
test-results-docker-17.0.6+10-unit
5.01 MB
sha256:b84cb1418180a32d2b2e44d3846dfc94be2c06bfb3aa2b7688298194910531f8
test-results-docker-17.0.6+10-variantcalling
31.8 KB
sha256:e9537e0b0d2d82edbf67b888dc2ed54b746c8bc92a6635df8c1a90b5212d9fbb