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Test GATK 4 only tests, no WDL

Changed flow allele filtering in Mutect2 to work separately on the tumor and the normal samples #1

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Changed flow allele filtering in Mutect2 to work separately on the tumor and the normal samples

Changed flow allele filtering in Mutect2 to work separately on the tumor and the normal samples #1

Triggered via pull request December 22, 2025 09:30
@ilyasoiferilyasoifer
synchronize #8855
Ultimagen:ilyasoifer/bioin-1674-mutect-af-update
Status Failure
Total duration 28m 54s
Artifacts 3

gatk-tests-ci.yml

on: pull_request
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Java 17.0.6+10 build and test variantcalling
Process completed with exit code 1.

Artifacts

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Name Size Digest
test-results-17.0.6+10-integration
582 KB
sha256:06da4c95516fe97b79e15c7cb8d154543a84a6d142f70fe56a2407ee048d1b9e
test-results-17.0.6+10-unit
5.07 MB
sha256:b7111034e56108beedbb4a5545ad015e948e29d4b1da7971971121e7547348b8
test-results-17.0.6+10-variantcalling
119 KB
sha256:03c6d51164ac48dbb066e01d568a1790eaf0d52e49e1545049348947f6554341