-
Notifications
You must be signed in to change notification settings - Fork 29
Open
Labels
enhancementNew feature or requestNew feature or request
Description
Create new workflow to manage lab data model post demux. This entails a few key to-dos:
- Improve naming of current existing data model (sample, sample_set, sample_set_set) now that we know how to create relational links between differently named Terra tables
- Convert all notebook code to WDL in order to greatly improve (and make consistent) the user experience
- Have separate WDL tasks for introspection and data model maintenance.
- Implement initially as a standalone workflow -- maybe some day include at the end of demux_deplete but not initially.
- Current scope: just support Terra-on-GCP (and be able to nop properly if introspection shows we're not in that environment). Eventually support Terra-on-Azure/WDS as well.
Metadata
Metadata
Assignees
Labels
enhancementNew feature or requestNew feature or request