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The error below occurs after selecting the file 'CP3Rt_2019_07_15_16_51_45__MR_9.nwb' upon start up of ecogvis. This file is shared via Box (ChangLabData_ShareWithCatalystNeuro/CP3)
No 'preprocessed' data in 'processing' group.
No 'high_gamma' data in 'processing' group.
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\hdmf\spec\namespace.py:470: UserWarning: ignoring namespace 'hdmf-common' because it already exists
warn("ignoring namespace '%s' because it already exists" % ns['name'])
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\hdmf\spec\namespace.py:470: UserWarning: ignoring namespace 'core' because it already exists
warn("ignoring namespace '%s' because it already exists" % ns['name'])
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
<ipython-input-8-1fba33462e73> in <module>
----> 1 main('')
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\ecogvis\ecogvis.py in main(filename)
969 if app is None:
970 app = QApplication(sys.argv) # instantiate a QtGui (holder for the app)
--> 971 ex = Application(filename=filename)
972 sys.exit(app.exec_())
973
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\ecogvis\ecogvis.py in __init__(self, filename, parent)
70
71 # Run the main function
---> 72 self.model = TimeSeriesPlotter(self)
73
74 def closeEvent(self, event):
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\ecogvis\functions\subFunctions.py in __init__(self, par)
83
84 self.current_rect = []
---> 85 self.badChannels = np.where( self.nwb.electrodes['bad'][:] )[0].tolist()
86
87 # Load invalid intervals from NWB file
C:\Anaconda\envs\ecogVIS_CatalystNeuro\lib\site-packages\hdmf\common\table.py in __getitem__(self, key)
502 return self.__indices[key]
503 else:
--> 504 raise KeyError(key)
505 else:
506 # index by int, list, or slice --> return pandas Dataframe consisting of one or more rows
KeyError: 'bad'
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