Checking the File type

pditommaso · pditommaso · commit af159f4cc3d0 · 2013-07-25T14:57:13.000+02:00
diff --git a/piper.nf b/piper.nf
@@ -368,7 +368,7 @@ exonerateGtf.each { file ->
 }
 
 simFolder = val()
-similarity.whenBound { file -> simFolder << file.parent }
+similarity.whenBound { file -> if(file instanceof File) simFolder << file.parent }
 
 /*
  * Compute the similarity Matrix

Original file line number	Diff line number	Diff line change
`@@ -368,7 +368,7 @@ exonerateGtf.each { file ->`
`368`	`368`	`}`
`369`	`369`
`370`	`370`	`simFolder = val()`
`371`		`-similarity.whenBound { file -> simFolder << file.parent }`
	`371`	`+similarity.whenBound { file -> if(file instanceof File) simFolder << file.parent }`
`372`	`372`
`373`	`373`	`/*`
`374`	`374`	`* Compute the similarity Matrix`