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I'll have to think about this a bit, but rather than running renv::restore() in an interactive session or on Open OnDemand, an alternative would be to run it as a SLURM job. The issue with that is that renv::restore() fairly often doesn't "just work", especially on the HPC where you might have forgotten to load some module to satisfy system dependencies of an R package. That being said, if it is "just working", it's probably easier to do sbatch renv.sh to install R packages than to get into an interactive session.
The text was updated successfully, but these errors were encountered:
I'll have to think about this a bit, but rather than running
renv::restore()
in an interactive session or on Open OnDemand, an alternative would be to run it as a SLURM job. The issue with that is thatrenv::restore()
fairly often doesn't "just work", especially on the HPC where you might have forgotten to load some module to satisfy system dependencies of an R package. That being said, if it is "just working", it's probably easier to dosbatch renv.sh
to install R packages than to get into an interactive session.The text was updated successfully, but these errors were encountered: