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Merge pull request #1090 from cdcepi/tasks_config_update
update config files in preparation for 2024/25 season
2 parents eae860a + f313725 commit dde0d62

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2 files changed

+285
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‎hub-config/admin.json‎

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@@ -1,14 +1,17 @@
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{
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"schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.1/admin-schema.json",
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"schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v3.0.1/admin-schema.json",
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"name": "US CDC FluSight",
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"maintainer": "US CDC",
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"contact": {
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"name": "Rebecca Borchering",
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"email": "[email protected]"
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},
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"repository_host": "GitHub",
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"repository_url": "https://github.com/cdcepi/FluSight-forecast-hub",
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"file_format": ["csv"],
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"repository": {
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"host": "github",
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"owner": "cdcepi",
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"repository": "FluSight-forecast-hub"
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},
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"file_format": ["csv", "parquet"],
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"timezone": "US/Eastern",
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"model_output_dir": "model-output",
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"cloud": {

‎hub-config/tasks.json‎

Lines changed: 278 additions & 1 deletion
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@@ -1,5 +1,5 @@
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{
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"schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v2.0.1/tasks-schema.json",
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"schema_version": "https://raw.githubusercontent.com/Infectious-Disease-Modeling-Hubs/schemas/main/v3.0.1/tasks-schema.json",
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"rounds": [
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{
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"round_id_from_variable": true,
@@ -269,6 +269,19 @@
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"type": "double",
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"minimum": 0
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}
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},
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"sample": {
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"output_type_id_params": {
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"is_required": false,
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"type": "integer",
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"min_samples_per_task": 100,
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"max_samples_per_task": 100,
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"compound_taskid_set" : ["reference_date", "location", "target"]
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},
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"value": {
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"type": "integer",
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"minimum": 0
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}
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}
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},
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"target_metadata": [
@@ -287,6 +300,270 @@
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"time_unit": "week"
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}
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]
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},
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{
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"task_ids": {
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"reference_date": {
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"required": null,
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"optional": [
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"2023-10-07", "2023-10-14", "2023-10-21", "2023-10-28", "2023-11-04",
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"2023-11-11", "2023-11-18", "2023-11-25", "2023-12-02",
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"2023-12-09", "2023-12-16", "2023-12-23", "2023-12-30",
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"2024-01-06", "2024-01-13", "2024-01-20", "2024-01-27",
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"2024-02-03", "2024-02-10", "2024-02-17", "2024-02-24",
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"2024-03-02", "2024-03-09", "2024-03-16", "2024-03-23",
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"2024-03-30", "2024-04-06", "2024-04-13", "2024-04-20",
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"2024-04-27", "2024-05-04", "2024-05-11"
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]
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},
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"target": {
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"required": null,
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"optional": ["peak inc flu hosp"]
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},
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"horizon": {
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"required": null,
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"optional": null
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},
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"location": {
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"required": null,
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"optional": [
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"US",
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"01",
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"02",
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"04",
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"05",
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"06",
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"08",
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"09",
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"10",
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"11",
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"12",
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"13",
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"15",
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"16",
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"17",
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"18",
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"19",
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"20",
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"21",
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"22",
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"23",
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"24",
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"25",
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"26",
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"27",
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"28",
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"29",
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"30",
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"31",
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"32",
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"33",
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"34",
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"35",
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"36",
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"37",
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"38",
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"39",
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"40",
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"41",
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"42",
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"44",
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"45",
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"46",
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"47",
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"48",
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"49",
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"50",
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"51",
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"53",
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"54",
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"55",
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"56",
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"72"
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]
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},
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"target_end_date": {
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"required": null,
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"optional": null
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}
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},
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"output_type": {
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"quantile": {
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"output_type_id": {
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"required": [
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0.01,
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0.025,
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0.05,
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0.1,
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0.15,
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0.2,
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0.25,
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0.3,
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0.35,
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0.4,
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0.45,
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0.5,
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0.55,
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0.6,
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0.65,
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0.7,
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0.75,
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0.8,
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0.85,
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0.9,
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0.95,
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0.975,
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0.99
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],
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"optional": null
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},
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"value": {
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"type": "double",
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"minimum": 0
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}
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}
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},
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"target_metadata": [
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{
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"target_id": "peak inc flu hosp",
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"target_name": "incident influenza hospitalizations in the season week with the highest hospitalizations",
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"target_units": "count",
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"target_keys": {
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"target": [
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"peak inc flu hosp"
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]
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},
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"target_type": "continuous",
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"description": "This target represents the count of new hospitalizations in the week of the season with the highest reported hospitalizations.",
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"is_step_ahead": false
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}
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]
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},
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{
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"task_ids": {
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"reference_date": {
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"required": null,
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"optional": [
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"2023-10-07", "2023-10-14", "2023-10-21", "2023-10-28", "2023-11-04",
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"2023-11-11", "2023-11-18", "2023-11-25", "2023-12-02",
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"2023-12-09", "2023-12-16", "2023-12-23", "2023-12-30",
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"2024-01-06", "2024-01-13", "2024-01-20", "2024-01-27",
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"2024-02-03", "2024-02-10", "2024-02-17", "2024-02-24",
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"2024-03-02", "2024-03-09", "2024-03-16", "2024-03-23",
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"2024-03-30", "2024-04-06", "2024-04-13", "2024-04-20",
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"2024-04-27", "2024-05-04", "2024-05-11"
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]
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},
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"target": {
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"required": null,
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"optional": ["peak week inc flu hosp"]
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},
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"horizon": {
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"required": null,
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"optional": null
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},
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"location": {
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"required": null,
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"optional": [
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"US",
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"01",
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"02",
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"04",
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"05",
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"06",
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"08",
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"09",
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"10",
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"11",
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"12",
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"13",
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"15",
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"16",
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"17",
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"18",
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"19",
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"20",
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"21",
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"22",
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"23",
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"24",
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"25",
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"26",
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"27",
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"28",
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"29",
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"30",
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"31",
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"32",
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"33",
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"34",
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"35",
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"36",
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"37",
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"38",
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"39",
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"40",
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"41",
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"42",
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"44",
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"45",
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"46",
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"47",
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"48",
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"49",
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"50",
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"51",
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"53",
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"54",
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"55",
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"56",
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"72"
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]
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},
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"target_end_date": {
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"required": null,
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"optional": null
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}
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},
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"output_type": {
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"pmf": {
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"output_type_id": {
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"required": [
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"2024-11-09", "2024-11-16", "2024-11-23",
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"2024-11-30", "2024-12-07", "2024-12-14",
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"2024-12-21", "2024-12-28", "2025-01-04",
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"2025-01-11", "2025-01-18", "2025-01-25",
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"2025-02-01", "2025-02-08", "2025-02-15",
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"2025-02-22", "2025-03-01", "2025-03-08",
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"2025-03-15", "2025-03-22", "2025-03-29",
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"2025-04-05", "2025-04-12", "2025-04-19",
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"2025-04-26", "2025-05-03", "2025-05-10",
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"2025-05-17", "2025-05-24", "2025-05-31"
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],
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"optional": null
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},
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"value": {
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"type": "double",
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"minimum": 0,
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"maximum": 1
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}
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}
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},
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"target_metadata": [
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{
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"target_id": "peak week inc flu hosp",
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"target_name": "season week with the highest hospitalizations",
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"target_units": "count",
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"target_keys": {
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"target": [
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"peak week inc flu hosp"
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]
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},
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"target_type": "date",
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"description": "This target represents the week of the season with the highest reported hospitalizations. This is the Saturday ending the epidemic week with the highest reported hospitalization count.",
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"is_step_ahead": false
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}
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]
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}
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],
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"submissions_due": {

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