Render tomogram with volume rendering

[manasaV3]

Motivation

To update the neuroglancer visualization config state generation to view 3D volume rendering of tomogram with pre-determined contrast limits so that users can see the tomogram by default.

Changes Required

In the tomogram state generation, add parameter volume_rendering_is_visible to True. ref: here.

The version of cryoet-data-portal-neuroglancer package included with the ingestion, should be be updated to include the new changes, and the config generation should be validated for any regressions. This can be done by comparing it to the existing rendering in prod for comparing the layers generated visually.

What done looks like

• All of the dataset's have been updated with the changes.
• The neuroglancer config has been regenerated for all the dataset and runs in staging and pass the validations
• The neuroglancer config has been updated in prod

Notes

• Related changes in chanzuckerberg/cryoet-data-portal-neuroglancer: feat: Add volume rendering contrast limits cryoet-data-portal-neuroglancer#25

• Verify that the static gain for the volume rendering works for all of the tomograms.