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documentation_cy3_dev.html
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<!DOCTYPE html>
<html lang="en">
<head>
<meta charset="utf-8">
<title>Cytoscape 3 Developer Documentation</title>
<link href="css/main.css" rel="stylesheet">
<script src="http://ajax.googleapis.com/ajax/libs/jquery/1.4.2/jquery.min.js"></script>
<script src="http://ajax.googleapis.com/ajax/libs/jqueryui/1.8.1/jquery-ui.min.js"></script>
<script src="js/global_variables.js"></script>
<script src="js/menu_generator.js"></script>
</head>
<body>
<div id="container">
<script src="js/header.js"></script>
<div id="documents">
<div class="blockfull">
<a href="cy3.html"><img src="images/cytoscape_logo_left.png" /></a>
<h2>Attention Developers: Cytoscape 3.0.0 has Released!</h2>
<h3>Port Your 2.x Plugins</h3>
<p>
With the release of the 3.0.0, now is the time to start
porting your 2.x plugins to 3.0 apps. Or to write new 3.0 apps. In the
sections below, you'll find links to documentation and tutorials related
to 3.0 app development.
</p>
<h3>New Cytoscape Code Repository on GitHub</h3>
<p>
<a href="https://github.com/cytoscape">
<img src="images/github.png" style="float:left; margin-left:0; margin-right:30px;" />
</a>
Cytoscape Core projects are now hosted on <a href="https://github.com/cytoscape">GitHub</a>.
From now on, latest version of Cytoscape code should be obtained from the following git repositories:
<ul>
<li><a href="https://github.com/cytoscape/cytoscape2">Cytoscape 2.x</a></li>
<li><a href="https://github.com/cytoscape/cytoscape">Cytoscape 3.x</a></li>
<li><a href="https://github.com/cytoscape/cytoscape.js">cytoscape.js</a></li>
</ul>
</p>
<p>
Note that Cytoscape 3 is a multi-repository project. You need to read
<a href="https://github.com/cytoscape/cytoscape/blob/develop/README.md">this</a>
document to learn how to clone all Cytoscape 3 projects.
</p>
</div>
<div class="blockleft">
<h2>Documentation and Tutorials for App Developers</h2>
<br />
<h3>What is Cytoscape 3.0?</h3>
<p>Learn about the
<a href="http://wiki.cytoscape.org/Cytoscape_3/CoreDevelopment">
Architecture, Backward Compatibility, and API
</a> of Cytoscape 3.0.
</p>
<h3>What are 3.0 Apps?</h3>
<p>Primary documentation for Cytoscape 3.0 <a href="http://wiki.cytoscape.org/Cytoscape_3/AppDeveloper">app development</a>.</p>
<br /><p>All Cytoscape 3.0 <a href="http://opentutorials.cgl.ucsf.edu/index.php/Portal:Cytoscape3">app development tutorials</a>.</p>
</div>
<div class="blockright">
<h2>Code for App Developers</h2>
<h4>Cytoscape 3.0.0 Released! (2/14/2013)</h4>
<h4>
<a href="download.php">Download Cytoscape 3.0.0 Release</a>
</h4>
<h4>
<a href="http://chianti.ucsd.edu/cytoscape-3.0.0/API">Cytoscape 3.0.0 JavaDocs</a>
</h4>
<h4>
<a href="http://chianti.ucsd.edu/cytoscape-3.0.0/swing-app-api-3.0.0.jar">API Jar 3.0.0</a>
</h4>
<h4>
<a href="https://github.com/cytoscape/cytoscape-app-developer/tree/3.0.0">3.0.0 App Developer Project Tag</a>
</h4>
</div>
<script src="js/footer.js"></script>
</div>
</body>
</html>