pom.xml

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
    <modelVersion>4.0.0</modelVersion>

    <artifactId>swagger-java-bitbucket-client</artifactId>
    <packaging>jar</packaging>
    <name>swagger-java-bitbucket-client</name>
    <groupId>io.dockstore</groupId>
    <version>2.0.4-SNAPSHOT</version>

    <properties>
        <github.url>scm:git:git@github.com:dockstore/swagger-java-bitbucket-client.git</github.url>
        <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
        <dockstore-core.version>1.15.0-prealpha.1</dockstore-core.version>
        <maven-failsafe.version>2.21.0</maven-failsafe.version>
        <maven-surefire.version>2.21.0</maven-surefire.version>
        <javadocExecutable>${java.home}/bin/javadoc</javadocExecutable>
    </properties>

    <dependencyManagement>
        <dependencies>
            <dependency>
                <groupId>io.dockstore</groupId>
                <artifactId>bom-internal</artifactId>
                <type>pom</type>
                <version>${dockstore-core.version}</version>
                <scope>import</scope>
            </dependency>
        </dependencies>
    </dependencyManagement>


    <repositories>
        <repository>
            <id>artifacts.oicr.on.ca</id>
            <name>artifacts.oicr.on.ca</name>
            <url>https://artifacts.oicr.on.ca/artifactory/collab-release</url>
        </repository>
        <repository>
            <id>apache-releases</id>
            <name>Apache Releases repository</name>
            <url>https://repository.apache.org/content/repositories/releases/</url>
        </repository>
    </repositories>

    <scm>
        <connection>${github.url}</connection>
        <developerConnection>${github.url}</developerConnection>
        <url>${github.url}</url>
      <tag>swagger-java-bitbucket-client-2.0.0</tag>
  </scm>

    <licenses>
        <license>
            <name>Apache Software License, Version 2.0</name>
            <url>https://www.apache.org/licenses/LICENSE-2.0</url>
        </license>
    </licenses>

    <distributionManagement>
        <repository>
            <id>central</id>
            <name>artifacts.oicr.on.ca-releases</name>
            <url>https://artifacts.oicr.on.ca/artifactory/collab-release</url>
        </repository>
    </distributionManagement>


    <build>
        <pluginManagement>
            <plugins>
                <!-- https://github.com/jacoco/jacoco/pull/760 -->
                <plugin>
                    <groupId>org.jacoco</groupId>
                    <artifactId>jacoco-maven-plugin</artifactId>
                    <version>0.8.5</version>
                </plugin>
                <plugin>
                    <groupId>com.googlecode.maven-download-plugin</groupId>
                    <artifactId>download-maven-plugin</artifactId>
                    <version>1.4.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-scm-publish-plugin</artifactId>
                    <version>3.0.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-compiler-plugin</artifactId>
                    <version>3.10.1</version>
                    <configuration>
                        <release>17</release>
                        <showDeprecation>true</showDeprecation>
                        <forceJavacCompilerUse>true</forceJavacCompilerUse>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-jar-plugin</artifactId>
                    <version>3.1.1</version>
                    <configuration>
                        <archive>
                            <manifest>
                                <addDefaultImplementationEntries>true</addDefaultImplementationEntries>
                                <addDefaultSpecificationEntries>true</addDefaultSpecificationEntries>
                            </manifest>
                        </archive>
                        <!-- exclude logback.xml -->
                        <excludes>
                            <exclude>**/logback.xml</exclude>
                        </excludes>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-checkstyle-plugin</artifactId>
                    <version>3.1.1</version>
                    <dependencies>
                        <dependency>
                            <groupId>com.puppycrawl.tools</groupId>
                            <artifactId>checkstyle</artifactId>
                            <!-- codacy currently using 8.34 -->
                            <version>8.34</version>
                        </dependency>
                    </dependencies>
                    <configuration>
                        <configLocation>checkstyle.xml</configLocation>
                        <suppressionsLocation>checkstyle-suppressions.xml</suppressionsLocation>
                        <includeTestSourceDirectory>true</includeTestSourceDirectory>
                        <includeTestResources>true</includeTestResources>
                        <includeResources>true</includeResources>
                    </configuration>
                </plugin>
                <plugin>
                    <artifactId>maven-dependency-plugin</artifactId>
                    <version>3.3.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-source-plugin</artifactId>
                    <version>3.2.1</version>
                    <executions>
                        <execution>
                            <id>attach-sources</id>
                            <goals>
                                <goal>jar</goal>
                            </goals>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-clean-plugin</artifactId>
                    <version>3.1.0</version>
                    <configuration>
                        <filesets>
                            <fileset>
                                <directory>datastore</directory>
                            </fileset>
                            <fileset>
                                <directory>cromwell-executions</directory>
                            </fileset>
                            <fileset>
                                <directory>cromwell-input</directory>
                            </fileset>
                            <fileset>
                                <directory>cromwell-workflow-logs</directory>
                            </fileset>
                            <fileset>
                                <directory>.</directory>
                                <includes>
                                    <include>Cromwell.stderr.txt</include>
                                    <include>Cromwell.stdout.txt</include>
                                </includes>
                            </fileset>
                        </filesets>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-deploy-plugin</artifactId>
                    <version>2.8.2</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-install-plugin</artifactId>
                    <version>2.5.2</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-site-plugin</artifactId>
                    <version>3.7.1</version>
                </plugin>
                <!-- fix at 2.7 until a solution to symbolic links not being copied is ready -->
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-resources-plugin</artifactId>
                    <version>2.7</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-surefire-plugin</artifactId>
                    <version>${maven-surefire.version}</version>
                    <configuration>
                        <reportFormat>plain</reportFormat>
                        <excludedGroups>${excludeGroups}</excludedGroups>
                        <skipTests>${skipTests}</skipTests>
                        <!-- enforce that tests should be independent -->
                        <runOrder>random</runOrder>
                        <!-- re-run flaky tests once -->
                        <rerunFailingTestsCount>1</rerunFailingTestsCount>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-failsafe-plugin</artifactId>
                    <version>${maven-failsafe.version}</version>
                    <configuration>
                        <reportFormat>plain</reportFormat>
                        <excludedGroups>${excludeGroups}</excludedGroups>
                        <!-- enforce that tests should be independent -->
                        <runOrder>random</runOrder>
                        <!-- re-run flaky tests once -->
                        <rerunFailingTestsCount>1</rerunFailingTestsCount>
                    </configuration>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-release-plugin</artifactId>
                    <version>2.5.3</version>
                </plugin>
                <plugin>
                    <groupId>com.github.spotbugs</groupId>
                    <artifactId>spotbugs-maven-plugin</artifactId>
                    <version>4.5.3.0</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-shade-plugin</artifactId>
                    <version>3.2.1</version>
                    <executions>
                        <execution>
                            <phase>package</phase>
                            <goals>
                                <goal>shade</goal>
                            </goals>
                            <configuration>
                                <transformers>
                                    <!-- Akka used by Cromwell expects a consistant reference.conf file.  Also order matters, so keep it first in the list of transformers -->
                                    <transformer implementation="org.apache.maven.plugins.shade.resource.AppendingTransformer">
                                        <resource>reference.conf</resource>
                                    </transformer>
                                </transformers>
                            </configuration>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-enforcer-plugin</artifactId>
                    <version>3.0.0-M3</version>
                </plugin>
                <plugin>
                    <groupId>org.apache.maven.plugins</groupId>
                    <artifactId>maven-javadoc-plugin</artifactId>
                    <version>3.0.0</version>
                </plugin>
                <plugin>
                    <groupId>net.alchim31.maven</groupId>
                    <artifactId>scala-maven-plugin</artifactId>
                    <version>4.4.1</version>
                </plugin>
                <plugin>
                    <groupId>org.codehaus.mojo</groupId>
                    <artifactId>build-helper-maven-plugin</artifactId>
                    <version>3.0.0</version>
                </plugin>
                <plugin>
                    <groupId>io.swagger</groupId>
                    <artifactId>swagger-codegen-maven-plugin</artifactId>
                    <version>2.4.21</version>
                </plugin>
                <!-- https://mvnrepository.com/artifact/io.swagger.codegen.v3/swagger-codegen-maven-plugin -->
                <plugin>
                    <groupId>io.swagger.codegen.v3</groupId>
                    <artifactId>swagger-codegen-maven-plugin</artifactId>
                    <version>3.0.36</version>
                </plugin>
                <!-- https://mvnrepository.com/artifact/org.codehaus.mojo/versions-maven-plugin -->
                <plugin>
                    <groupId>org.codehaus.mojo</groupId>
                    <artifactId>versions-maven-plugin</artifactId>
                    <version>2.7</version>
                </plugin>
                <plugin>
                    <groupId>org.codehaus.mojo</groupId>
                    <artifactId>license-maven-plugin</artifactId>
                    <version>2.0.0</version>
                </plugin>
                <plugin>
                    <artifactId>exec-maven-plugin</artifactId>
                    <version>1.6.0</version>
                    <groupId>org.codehaus.mojo</groupId>
                    <executions>
                        <execution>
                            <id>Install git-secrets</id>
                            <phase>initialize</phase>
                            <goals>
                                <goal>exec</goal>
                            </goals>
                            <configuration>
                                <executable>bash</executable>
                                <commandlineArgs>${project.parent.basedir}/scripts/install-git-hooks.sh</commandlineArgs>
                            </configuration>
                        </execution>
                    </executions>
                </plugin>
                <plugin>
                    <groupId>org.codehaus.mojo</groupId>
                    <artifactId>flatten-maven-plugin</artifactId>
                    <version>1.2.2</version>
                    <configuration>
                        <outputDirectory>${project.basedir}/generated/src/main/resources/</outputDirectory>
                        <updatePomFile>false</updatePomFile>
                        <!-- snyk is picky about filenames -->
                        <flattenedPomFilename>pom.xml</flattenedPomFilename>
                    </configuration>
                    <executions>
                        <!-- enable flattening -->
                        <execution>
                            <id>flatten</id>
                            <phase>validate</phase>
                            <goals>
                                <goal>flatten</goal>
                            </goals>
                        </execution>
                        <!-- ensure proper cleanup -->
                        <execution>
                            <id>flatten.clean</id>
                            <phase>clean</phase>
                            <goals>
                                <goal>clean</goal>
                            </goals>
                        </execution>
                    </executions>
                </plugin>
            </plugins>
        </pluginManagement>

        <plugins>
            <plugin>
                <groupId>io.swagger</groupId>
                <artifactId>swagger-codegen-maven-plugin</artifactId>
                <executions>
                    <execution>
                        <goals>
                            <goal>generate</goal>
                        </goals>
                        <configuration>
                            <inputSpec>${project.basedir}/swagger.yaml</inputSpec>
                            <language>java</language>
                            <configOptions>
                                <sourceFolder>src/gen/java/main</sourceFolder>
                                <library>jersey2</library>
                                <dateLibrary>java8</dateLibrary>
                                <invokerPackage>io.swagger.bitbucket.client</invokerPackage>
                                <modelPackage>io.swagger.bitbucket.client.model</modelPackage>
                                <apiPackage>io.swagger.bitbucket.client.api</apiPackage>
                            </configOptions>
                            <generateModelTests>false</generateModelTests>
                            <generateApiTests>false</generateApiTests>
                            <generateModelDocumentation>false</generateModelDocumentation>
                            <generateApiDocumentation>false</generateApiDocumentation>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>com.google.code.maven-replacer-plugin</groupId>
                <artifactId>replacer</artifactId>
                <version>1.5.3</version>
                <executions>
                    <execution>
                        <id>replace1</id>
                        <phase>generate-sources</phase>
                        <goals>
                            <goal>replace</goal>
                        </goals>
                    </execution>
                    <!-- not sure why swagger-codegen-maven-plugin runs in two phases -->
                    <execution>
                        <id>replace2</id>
                        <phase>compile</phase>
                        <goals>
                            <goal>replace</goal>
                        </goals>
                    </execution>
                </executions>
                <configuration>
                    <includes>
                        <include>${pom.basedir}/target/generated-sources/swagger/src/gen/java/**/*.java</include>
                        <include>${pom.basedir}/target/generated-sources/swagger/src/main/java/**/*.java</include>
                    </includes>
                    <regex>false</regex>
                    <replacements>
                        <!-- for these jakarta replacements, we can do better after https://github.com/swagger-api/swagger-codegen/issues/11797 -->
                        <replacement>
                            <token>javax.annotation</token>
                            <value>jakarta.annotation</value>
                        </replacement>
                        <replacement>
                            <token>@javax.annotation</token>
                            <value>@jakarta.annotation</value>
                        </replacement>
                        <replacement>
                            <token>javax.validation</token>
                            <value>jakarta.validation</value>
                        </replacement>
                        <replacement>
                            <token>javax.ws</token>
                            <value>jakarta.ws</value>
                        </replacement>
                        <replacement>
                            <token>javax.servlet</token>
                            <value>jakarta.servlet</value>
                        </replacement>
                        <replacement>
                            <token>javax.xml.bind</token>
                            <value>jakarta.xml.bind</value>
                        </replacement>
                        <replacement>
                            <token>javax.xml.bind</token>
                            <value>jakarta.xml.bind</value>
                        </replacement>
                    </replacements>
                </configuration>
            </plugin>
            <!-- auto-generated java classes should not fail the build on style -->
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-checkstyle-plugin</artifactId>
                <configuration>
                    <skip>true</skip>
                    <enableFilesSummary>true</enableFilesSummary>
                    <enableRulesSummary>true</enableRulesSummary>
                    <failOnViolation>false</failOnViolation>
                    <failsOnError>false</failsOnError>
                </configuration>
                <executions>
                    <execution>
                        <phase>
                            compile
                        </phase>
                        <goals>
                            <goal>check</goal>
                        </goals>
                        <configuration>
                            <consoleOutput>true</consoleOutput>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
            <!-- auto-generated java classes should not fail the build on bugs -->
            <plugin>
                <groupId>com.github.spotbugs</groupId>
                <artifactId>spotbugs-maven-plugin</artifactId>
                <executions>
                    <execution>
                        <goals>
                            <goal>check</goal>
                        </goals>
                    </execution>
                </executions>
                <configuration>
                    <failOnError>false</failOnError>
                    <excludeFilterFile>https://raw.githubusercontent.com/dockstore/dockstore/1.11.6/findbugs-exclude.xml</excludeFilterFile>
                </configuration>
            </plugin>

            <plugin>
                <artifactId>maven-dependency-plugin</artifactId>
                <executions>
                    <execution>
                        <phase>package</phase>
                        <goals>
                            <goal>copy-dependencies</goal>
                        </goals>
                        <configuration>
                            <outputDirectory>${project.build.directory}/lib</outputDirectory>
                        </configuration>
                    </execution>
                    <execution>
                        <id>analyze</id>
                        <goals>
                            <goal>analyze-only</goal>
                        </goals>
                        <configuration>
                            <failOnWarning>true</failOnWarning>
                            <outputXML>true</outputXML>
                            <ignoreNonCompile>true</ignoreNonCompile>
                            <usedDependencies>
                                <usedDependency>com.fasterxml.jackson.core:jackson-core</usedDependency>
                            </usedDependencies>
                        </configuration>
                    </execution>
                </executions>
            </plugin>

            <!-- attach test jar -->
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-jar-plugin</artifactId>
                <executions>
                    <execution>
                        <goals>
                            <goal>test-jar</goal>
                        </goals>
                    </execution>
                </executions>
                <configuration>
                </configuration>
            </plugin>

            <plugin>
                <groupId>org.codehaus.mojo</groupId>
                <artifactId>build-helper-maven-plugin</artifactId>
                <executions>
                    <execution>
                        <id>test</id>
                        <phase>generate-sources</phase>
                        <goals>
                            <goal>add-source</goal>
                        </goals>
                        <configuration>
                            <sources>
                                <source>${basedir}/target/generated-sources</source>
                            </sources>
                        </configuration>
                    </execution>
                    <execution>
                        <id>add_sources</id>
                        <phase>generate-sources</phase>
                        <goals>
                            <goal>add-source</goal>
                        </goals>
                        <configuration>
                            <sources>
                                <source>src/main/java</source>
                            </sources>
                        </configuration>
                    </execution>
                    <execution>
                        <id>add_test_sources</id>
                        <phase>generate-test-sources</phase>
                        <goals>
                            <goal>add-test-source</goal>
                        </goals>
                        <configuration>
                            <sources>
                                <source>src/test/java</source>
                            </sources>
                        </configuration>
                    </execution>
                </executions>
            </plugin>
            <plugin>
                <groupId>org.apache.maven.plugins</groupId>
                <artifactId>maven-compiler-plugin</artifactId>
            </plugin>
            <plugin>
                <groupId>org.codehaus.mojo</groupId>
                <artifactId>flatten-maven-plugin</artifactId>
            </plugin>
        </plugins>
    </build>

    <dependencies>
        <!-- dependencies are needed for the client being generated -->


        <dependency>
            <groupId>io.swagger</groupId>
            <artifactId>swagger-annotations</artifactId>
        </dependency>

        <!-- HTTP client: jersey-client -->
        <dependency>
            <groupId>org.glassfish.jersey.core</groupId>
            <artifactId>jersey-client</artifactId>
        </dependency>
        <dependency>
            <groupId>org.glassfish.jersey.media</groupId>
            <artifactId>jersey-media-json-jackson</artifactId>
            <exclusions>
                <exclusion>
                    <groupId>com.fasterxml.jackson.jaxrs</groupId>
                    <artifactId>jackson-jaxrs-base</artifactId>
                </exclusion>
                <exclusion>
                    <groupId>com.fasterxml.jackson.core</groupId>
                    <artifactId>jackson-annotations</artifactId>
                </exclusion>
                <exclusion>
                    <groupId>org.glassfish.jersey.core</groupId>
                    <artifactId>jersey-common</artifactId>
                </exclusion>
                <exclusion>
                    <groupId>com.fasterxml.jackson.jaxrs</groupId>
                    <artifactId>jackson-jaxrs-json-provider</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>org.glassfish.jersey.media</groupId>
            <artifactId>jersey-media-multipart</artifactId>
        </dependency>

        <!-- JSON processing: jackson -->
        <dependency>
            <groupId>com.fasterxml.jackson.core</groupId>
            <artifactId>jackson-core</artifactId>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.core</groupId>
            <artifactId>jackson-annotations</artifactId>
            <exclusions>
                <exclusion>
                    <groupId>com.fasterxml.jackson.core</groupId>
                    <artifactId>jackson-annotations</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>com.fasterxml.jackson.core</groupId>
            <artifactId>jackson-databind</artifactId>
            <exclusions>
                <exclusion>
                    <groupId>com.fasterxml.jackson.core</groupId>
                    <artifactId>jackson-annotations</artifactId>
                </exclusion>
            </exclusions>
        </dependency>
        <dependency>
            <groupId>jakarta.ws.rs</groupId>
            <artifactId>jakarta.ws.rs-api</artifactId>
        </dependency>
        <dependency>
            <groupId>org.glassfish.jersey.core</groupId>
            <artifactId>jersey-common</artifactId>
        </dependency>

        <dependency>
            <groupId>com.fasterxml.jackson.datatype</groupId>
            <artifactId>jackson-datatype-jsr310</artifactId>
        </dependency>
    </dependencies>
</project>