overcoming scaling issues.

Author: ttuff

Flight_line_processing_vignette.ipynb

@@ -83,7 +83,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 1,
+   "execution_count": 7,
    "id": "3ef913d0-cb8a-4b4a-8367-fa6ff501f027",
    "metadata": {},
    "outputs": [],
@@ -99,21 +99,16 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 2,
+   "execution_count": 8,
    "id": "f3e25445-87f1-4374-ba9c-fc46a40cf35c",
    "metadata": {},
    "outputs": [
     {
      "name": "stdout",
      "output_type": "stream",
      "text": [
-      "Collecting spectral\n",
-      "  Downloading spectral-0.23.1-py3-none-any.whl.metadata (1.3 kB)\n",
+      "Requirement already satisfied: spectral in /opt/conda/envs/macrosystems/lib/python3.10/site-packages (0.23.1)\n",
       "Requirement already satisfied: numpy in /opt/conda/envs/macrosystems/lib/python3.10/site-packages (from spectral) (1.26.3)\n",
-      "Downloading spectral-0.23.1-py3-none-any.whl (212 kB)\n",
-      "\u001b[2K   \u001b[90m━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━━\u001b[0m \u001b[32m212.9/212.9 kB\u001b[0m \u001b[31m6.7 MB/s\u001b[0m eta \u001b[36m0:00:00\u001b[0m\n",
-      "\u001b[?25hInstalling collected packages: spectral\n",
-      "Successfully installed spectral-0.23.1\n",
       "Note: you may need to restart the kernel to use updated packages.\n"
      ]
     }
@@ -124,7 +119,7 @@
   },
   {
    "cell_type": "code",
-   "execution_count": 57,
+   "execution_count": 10,
    "id": "feecdd2a-7c7c-47fe-9b1e-fa11b646ec05",
    "metadata": {},
    "outputs": [
@@ -134,7 +129,7 @@
      "text": [
       "The autoreload extension is already loaded. To reload it, use:\n",
       "  %reload_ext autoreload\n",
-      "['ENVIProcessor', 'GradientBoostingRegressor', '__builtins__', '__cached__', '__file__', '__loader__', '__name__', '__package__', '__spec__', 'apply_topo_and_brdf_corrections', 'boosted_quantile_plot', 'boosted_quantile_plot_by_sensor', 'box', 'clean_csv_files_in_subfolders', 'clean_data_and_write_to_csv', 'concatenate_sensors', 'control_function', 'download_neon_file', 'download_neon_flight_lines', 'extract_overlapping_layers_to_2d_dataframe', 'find_raster_files', 'fit_models_with_different_alpha', 'flight_lines_to_envi', 'generate_config_json', 'generate_correction_configs', 'generate_correction_configs_for_directory', 'get_spectral_data_and_wavelengths', 'glob', 'go_forth_and_multiply', 'gpd', 'h5py', 'ht', 'jefe', 'json', 'load_and_combine_rasters', 'load_spectra', 'mask', 'np', 'open_image', 'os', 'pd', 'plot_each_sensor_with_highlight', 'plot_spectral_data', 'plot_with_highlighted_sensors', 'plt', 'prepare_spectral_data', 'process_all_subdirectories', 'process_and_flatten_array', 'process_hdf5_with_neon2envi', 'random', 'rasterio', 'rasterize', 'rasterize_polygons_to_match_envi', 'ray', 'requests', 'resample_translation_to_other_sensors', 'reshape_spectra', 'show', 'show_rgb', 'subprocess', 'time', 'tqdm', 'translate_to_other_sensors']\n"
+      "['CRS', 'ENVIProcessor', 'GradientBoostingRegressor', 'Resampling', '__builtins__', '__cached__', '__file__', '__loader__', '__name__', '__package__', '__spec__', 'apply_topo_and_brdf_corrections', 'boosted_quantile_plot', 'boosted_quantile_plot_by_sensor', 'box', 'calculate_default_transform', 'clean_csv_files_in_subfolders', 'clean_data_and_write_to_csv', 'concatenate_sensors', 'control_function', 'download_neon_file', 'download_neon_flight_lines', 'extract_overlapping_layers_to_2d_dataframe', 'find_raster_files', 'fit_models_with_different_alpha', 'flight_lines_to_envi', 'generate_config_json', 'generate_correction_configs', 'generate_correction_configs_for_directory', 'get_spectral_data_and_wavelengths', 'glob', 'go_forth_and_multiply', 'gpd', 'h5py', 'ht', 'jefe', 'json', 'load_and_combine_rasters', 'load_spectra', 'mask', 'mask_raster_with_polygons', 'np', 'open_image', 'os', 'pd', 'plot_each_sensor_with_highlight', 'plot_spectral_data', 'plot_with_highlighted_sensors', 'plt', 'prepare_spectral_data', 'process_all_envi_files_with_mask', 'process_all_subdirectories', 'process_and_flatten_array', 'process_base_folder', 'process_folder_with_polygons', 'process_hdf5_with_neon2envi', 'random', 'rasterio', 'rasterize', 'rasterize_polygons_to_match_envi', 'ray', 'reproject', 'requests', 'resample_translation_to_other_sensors', 'reshape_spectra', 'show', 'show_rgb', 'subprocess', 'time', 'tqdm', 'translate_to_other_sensors', 'validate_output_files', 'warnings']\n"
      ]
     }
    ],