diff --git a/tools/tertiary-analysis/decoupler/get_test_data.sh b/tools/tertiary-analysis/decoupler/get_test_data.sh index 064d6909..42cd5862 100644 --- a/tools/tertiary-analysis/decoupler/get_test_data.sh +++ b/tools/tertiary-analysis/decoupler/get_test_data.sh @@ -21,8 +21,17 @@ pushd test-data get_data $MTX_LINK $BASENAME_FILE +# Download input anndata for decoupler-pathway_inference BASENAME_FILE='pbmc3k_processed.h5ad' MTX_LINK='https://zenodo.org/records/3752813/files/pbmc3k_processed.h5ad' -get_data $MTX_LINK $BASENAME_FILE \ No newline at end of file +get_data $MTX_LINK $BASENAME_FILE + +# Download output anndata for decoupler-pathway_inference +BASENAME_FILE='test.h5ad' + +MTX_LINK='https://zenodo.org/records/10401958/files/test.h5ad' + +get_data $MTX_LINK $BASENAME_FILE + diff --git a/tools/tertiary-analysis/decoupler/test-data/test.h5ad b/tools/tertiary-analysis/decoupler/test-data/test.h5ad deleted file mode 100644 index c6cae528..00000000 Binary files a/tools/tertiary-analysis/decoupler/test-data/test.h5ad and /dev/null differ