update section two

Author: avallecam

instructors/02-practical-tutors.qmd

@@ -78,7 +78,7 @@ Within your room, Write your answers to these questions:
     - For the incubation period, steps are similar to generation time.
 - Add generation time and delays using the {EpiNow2} helper functions in `EpiNow2::epinow()`.
 - Run `EpiNow2::epinow()` and print the summary and plot outputs.
-- Interpret and reply to questions.
+- Paste the outputs. Reply to questions.
 
 ### Inputs
 
@@ -356,6 +356,16 @@ Within your room, Write your answers to these questions:
 - Interpret: How would you communicate these results to a decision-maker?
 - Compare: What differences do you identify from other room outputs? (if available)
 
+**Steps:**
+
+- Open the file `02-practical-activity-2.R`.
+- Paste the URL link as a string to read input data.
+- Fill in the argument to plot an incidence curve.
+- Evaluate if the input data format needs adaptation to {cfr}.
+- Access to the probability distribution for the delay from case onset to death.
+- Evaluate if you need to keep dates or omit using `dplyr::filter()`.
+- Estimate the naive and delay-adjusted CFR.
+- Paste the outputs. Reply to questions.
 
 ### Inputs
 
@@ -369,10 +379,6 @@ Within your room, Write your answers to these questions:
 
 ::: {.content-visible when-format="docx"}
 
-### Your Code
-
-Use the file `02-practical-activity-2.R`.
-
 
 ### Your Answers
 

instructors/files/02-practical-tutors.md

@@ -57,7 +57,7 @@ Within your room, Write your answers to these questions:
 - Add generation time and delays using the {EpiNow2} helper functions in
   `EpiNow2::epinow()`.
 - Run `EpiNow2::epinow()` and print the summary and plot outputs.
-- Interpret and reply to questions.
+- Paste the outputs. Reply to questions.
 
 ### Inputs
 
@@ -459,6 +459,18 @@ Within your room, Write your answers to these questions:
 - Compare: What differences do you identify from other room outputs? (if
   available)
 
+**Steps:**
+
+- Open the file `02-practical-activity-2.R`.
+- Paste the URL link as a string to read input data.
+- Fill in the argument to plot an incidence curve.
+- Evaluate if the input data format needs adaptation to {cfr}.
+- Access to the probability distribution for the delay from case onset
+  to death.
+- Evaluate if you need to keep dates or omit using `dplyr::filter()`.
+- Estimate the naive and delay-adjusted CFR.
+- Paste the outputs. Reply to questions.
+
 ### Inputs
 
 | Room | Data | Action to data input | Link |