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coot.appdata.xml.patch
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diff --git a/coot.appdata.xml b/coot.appdata.xml
index 19bccb947..3b6e9fd14 100644
--- a/coot.appdata.xml
+++ b/coot.appdata.xml
@@ -1,36 +1,75 @@
<?xml version="1.0" encoding="UTF-8"?>
-<!-- Copyright 2014 Paul Emsley <pemsley at mrc dash lmb dot cam dot ac dot uk> -->
+<!-- Copyright 2014-2024 Paul Emsley <[email protected]> -->
<component type="desktop">
- <id>org.emsley.coot</id>
- <metadata_license>GFDL-1.3</metadata_license>
- <project_license>GPL-2.0+ and GPL-3.0+ and LGPL-3.0+</project_license>
- <name>Coot</name>
- <summary>Macromolecular model builder</summary>
- <description>
- <p>
- Coot is a powerful macromolecular model-building tool for
- analysing X-ray data and models (i.e. proteins, ligands, RNA and
- DNA). There are many tools for model manipulation and building,
- such as minimization, molecular superposition, fragment
- rotation/translations, rotamer-fitting, de novo building and
- refinement.
- </p>
- <p>
- Coot is used by scientists using X-ray crystallography for
- analysis of proteins, electron density maps, protein interactions
- and drug design.
- </p>
- </description>
- <screenshots>
- <screenshot type="default">
- <image type="source">http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/screenshots/other/coot-viagra-1.png</image>
- <caption>Coot is typically used to view protein models and electron density</caption>
- </screenshot>
- <screenshot>
- <image type="source">http://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/screenshots/other/coot-ligand-builder.png</image>
- <caption>Coot can be used to convert from 2D ligands to 3D and from 3D to 2D</caption>
- </screenshot>
- </screenshots>
- <url type="homepage">http://www2.mrc-lmb.cam.ac.uk/Personal/pemsley/coot/</url>
- <updatecontact>pemsley _at_ mrc dash lmb.cam.ac.uk</updatecontact>
+ <id>io.github.pemsley.coot</id>
+ <launchable type="desktop-id">io.github.pemsley.coot.desktop</launchable>
+ <metadata_license>GFDL-1.3</metadata_license>
+ <project_license>GPL-2.0+ and GPL-3.0+ and LGPL-3.0+</project_license>
+ <name>Coot</name>
+ <summary>Macromolecular model builder</summary>
+ <description>
+ <p>
+ Coot is a powerful macromolecular model-building tool for
+ analysing X-ray data and models (i.e. proteins, ligands, RNA and
+ DNA). There are many tools for model manipulation and building,
+ such as minimization, molecular superposition, fragment
+ rotation/translations, rotamer-fitting, de novo building and
+ refinement.
+ </p>
+ <p>
+ Coot is used by scientists using X-ray crystallography or cryo-EM for
+ analysis of proteins, electron density maps, protein interactions
+ and drug design.
+ </p>
+ </description>
+ <screenshots>
+ <screenshot type="default">
+ <image type="source">
+ https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/screenshots/other/coot-viagra-1.png</image>
+ <caption>Coot is typically used to view protein models and electron density</caption>
+ </screenshot>
+ <screenshot>
+ <image type="source">
+ https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/screenshots/other/coot-ligand-builder.png</image>
+ <caption>Coot can be used to convert from 2D ligands to 3D and from 3D to 2D</caption>
+ </screenshot>
+ <screenshot>
+ <image type="source">
+ https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/screenshots/apoferritin/sapphires-and-emeralds.png</image>
+ </screenshot>
+ </screenshots>
+ <branding>
+ <color type="primary" scheme_preference="light">#dcc9c7</color>
+ <color type="primary" scheme_preference="dark">#79170a</color>
+ </branding>
+ <url type="homepage">https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/</url>
+ <url type="faq">https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/docs/coot-faq.html</url>
+ <url type="help">https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/web/docs</url>
+ <url type="vcs-browser">https://github.com/pemsley/coot</url>
+ <url type="bugtracker">https://github.com/pemsley/coot/issues</url>
+ <developer id="io.github.pemsley">
+ <name>Paul Emsley</name>
+ </developer>
+ <update_contact>pemsley_AT_mrc-lmb.cam.ac.uk</update_contact>
+ <content_rating type="oars-1.1" />
+ <releases>
+ <release version="1.1.10" date="2024-07-21">
+ <description>
+ <ul>
+ <li>FEATURE: Noughties-physics - add a refinement/atom manipulation mode so that Coot behaves like it used to up to (and including) version 0.8.x: `coot.set_refine_use_noughties_physics()`.</li>
+ <li>FEATURE: Layla now displays QED Scores for molecules.</li>
+ <li>FEATURE: `read_coordinates()` added to the Coot.</li>
+ <li>FEATURE: Cryo-EM servalcat use added to the Coot API.</li>
+ <li>CHANGE: Network download files now follow the XDG Base Directory Protocol.</li>
+ <li>CHANGE: HUD Ramachandran Plot is now pickable.</li>
+ <li>CHANGE: Ligands with no dictionary are drawn with bonds in "Colour by Chain" mode.</li>
+ <li>CHANGE: Python requests is no longer a dependency.</li>
+ <li>BUG-FIX: Scroll wheel indicator in the Display Manager now correctly updates on use of a key-binding to change the scrollable map.</li>
+ <li>BUG-FIX: Ugly least-squares fit dialog has been modernized.</li>
+ <li>BUG-FIX: Fix the callback actions for the "Display Hydrogen Atoms" in the Bonds control dialog.</li>
+ <li>BUG-FIX: Rework the calculation of `pkg_data_dir()` - particularly in the case of relocatable binaries.</li>
+ </ul>
+ </description>
+ </release>
+ </releases>
</component>