Skip to content

Commit 237a9b5

Browse files
committed
fix
1 parent dc770a0 commit 237a9b5

File tree

1 file changed

+1
-1
lines changed

1 file changed

+1
-1
lines changed

src/main/scala/com/fulcrumgenomics/umi/CorrectUmis.scala

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -166,7 +166,7 @@ class CorrectUmis
166166
override def execute(): Unit = {
167167
// Construct the full set of UMI sequences to match again
168168
val (umiSequences, umiLength) = {
169-
val set = mutable.HashSet[String](umis:_*)
169+
val set = mutable.HashSet[String](umis.map(_.toUpperCase):_*)
170170
umiFiles.foreach(Io.readLines(_).map(_.trim.toUpperCase).filter(_.nonEmpty).foreach(set.add))
171171
validate(set.nonEmpty, s"At least one UMI sequence must be provided; none found in files ${umiFiles.mkString(", ")}")
172172

0 commit comments

Comments
 (0)