Kallisto quant output issue.

[mthang]

It seems like this output is wrong (see from_work_dir="abundance.txt") in the line below. I suppose this should output a bam file not abundance.txt.

tools-iuc/tools/kallisto/kallisto_quant.xml

Line 105 in ff0a9b6

<data format="bam" name="pseudobam_output" from_work_dir="abundance.txt" label="${tool.name} on ${on_string}: Pseudoalignments">