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bshifaw
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updated gatk docker to 4.2.0.0 (#60)
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haplotypecaller-gvcf-gatk4.wdl

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@@ -39,7 +39,7 @@ workflow HaplotypeCallerGvcf_GATK4 {
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Boolean make_gvcf = true
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Boolean make_bamout = false
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String gatk_docker = "us.gcr.io/broad-gatk/gatk:4.1.9.0"
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String gatk_docker = "us.gcr.io/broad-gatk/gatk:4.2.0.0"
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String gatk_path = "/gatk/gatk"
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String gitc_docker = "us.gcr.io/broad-gotc-prod/genomes-in-the-cloud:2.4.7-1603303710"
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String samtools_path = "samtools"

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