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1 parent 34ae610 commit 4d8130fCopy full SHA for 4d8130f
haplotypecaller-gvcf-gatk4.wdl
@@ -39,7 +39,7 @@ workflow HaplotypeCallerGvcf_GATK4 {
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Boolean make_gvcf = true
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Boolean make_bamout = false
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- String gatk_docker = "us.gcr.io/broad-gatk/gatk:4.1.9.0"
+ String gatk_docker = "us.gcr.io/broad-gatk/gatk:4.2.0.0"
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String gatk_path = "/gatk/gatk"
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String gitc_docker = "us.gcr.io/broad-gotc-prod/genomes-in-the-cloud:2.4.7-1603303710"
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String samtools_path = "samtools"
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