From a85c38bc89e10d3356f0df8511883ee15fd2c6fc Mon Sep 17 00:00:00 2001
From: mernst <m.ernst@bo.berlin>
Date: Wed, 10 Jul 2024 12:54:54 +0200
Subject: [PATCH 1/2] [#4] Added URI mapping & extended example file

---
 .../abcd2bioschemas/abcd2bioschemas-xml.xslt   | 18 ++++++++++++++++++
 .../example_files/HoffmannPlantsV3.xml         |  2 ++
 2 files changed, 20 insertions(+)

diff --git a/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt b/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
index f89327a..5160e1e 100644
--- a/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
+++ b/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
@@ -12,6 +12,8 @@ exclude-result-prefixes="xsl md panxslt set">
 
   <xsl:output method="xml" version="1.0" encoding="UTF-8" indent="yes"/>
   <xsl:variable name="dataset_id" select="/abcd:DataSets/abcd:DataSet/abcd:DatasetGUID"></xsl:variable>
+  <xsl:variable name="dataset_icon" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:IconURI"></xsl:variable>
+  <xsl:variable name="dataset_access" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:DirectAccessURI"></xsl:variable>
   <xsl:variable name="dataset_title" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:Title"></xsl:variable>
   <xsl:variable name="dataset_details" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:Details"></xsl:variable>
   <xsl:variable name="dataset_url" select="/abcd:DataSets/abcd:DataSet/abcd:Metadata/abcd:Description/abcd:Representation/abcd:URI"></xsl:variable>
@@ -63,6 +65,22 @@ exclude-result-prefixes="xsl md panxslt set">
           </xsl:choose>
        <!-- </xsl:variable>-->
       </description>
+      <xsl:if test="$dataset_icon">
+        <image><xsl:value-of select="$dataset_icon" /></image>
+      </xsl:if>
+      <xsl:if test="$dataset_access">
+        <distribution type="DataDownload">
+          <xsl:choose>
+            <xsl:when test="contains($dataset_access,'.zip')">
+              <contentUrl><xsl:value-of select="$dataset_access" /></contentUrl>
+              <encodingFormat>application/zip</encodingFormat>
+            </xsl:when>
+            <xsl:otherwise>
+              <url><xsl:value-of select="$dataset_access" /></url>
+            </xsl:otherwise>
+          </xsl:choose>
+        </distribution>
+      </xsl:if>
       <inLanguage>en</inLanguage>
       <xsl:for-each select="$recordbasis[not(.=preceding::*)]">  
         <additionalType><xsl:value-of select="."/></additionalType>
diff --git a/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml b/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml
index a978265..f7e95f6 100644
--- a/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml
+++ b/transformations/abcd2bioschemas/example_files/HoffmannPlantsV3.xml
@@ -24,6 +24,8 @@
                     <URI>https://data.bgbm.org/dataset/gfbio/0004/</URI>
                 </Representation>
             </Description>
+            <IconURI>http://ww3.bgbm.org/providerResources/BGBM.jpg</IconURI>
+            <DirectAccessURI>https://data-rebind.bgbm.org/rest//db/gfbio/public/GFBioHoffmannPlants/archive/HoffmannPlantsV2.xml.zip</DirectAccessURI>
             <RevisionData>
                 <Creators>Dr. Anke Hoffmann</Creators>
                 <Contributors>Tom Friday Baluku, Maren Gleisberg</Contributors>

From 1560786f5c159010ab9b8e7220ac8f97568cdc03 Mon Sep 17 00:00:00 2001
From: mernst <mernst@zedat.fu-berlin.de>
Date: Mon, 26 Aug 2024 08:50:22 +0200
Subject: [PATCH 2/2] [#4] Checking for http in icon uri.

---
 .../abcd2bioschemas/abcd2bioschemas-xml.xslt          | 11 ++++++++++-
 1 file changed, 10 insertions(+), 1 deletion(-)

diff --git a/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt b/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
index 5160e1e..3fc44df 100644
--- a/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
+++ b/transformations/abcd2bioschemas/abcd2bioschemas-xml.xslt
@@ -66,7 +66,16 @@ exclude-result-prefixes="xsl md panxslt set">
        <!-- </xsl:variable>-->
       </description>
       <xsl:if test="$dataset_icon">
-        <image><xsl:value-of select="$dataset_icon" /></image>
+        <xsl:choose>
+          <xsl:when test="contains($dataset_icon, 'http')">
+            <image><xsl:value-of select="$dataset_icon" /></image>
+          </xsl:when>
+          <xsl:otherwise>
+            <image type="ImageObject">
+              <identifier><xsl:value-of select="$dataset_icon" /></identifier>
+            </image>
+          </xsl:otherwise>
+        </xsl:choose>
       </xsl:if>
       <xsl:if test="$dataset_access">
         <distribution type="DataDownload">