This repository was archived by the owner on Mar 20, 2020. It is now read-only.
This repository was archived by the owner on Mar 20, 2020. It is now read-only.
Roadmap: Integrate HaploBlocker into Database objects #23
Description
Followup #19.
https://docs.google.com/document/d/1o_IWThHWK4qyyXk3-X4rZ2KJNGTbf-pPCRhzVmnQ1Xg/edit#
Much of haplonetwork.py needs to be rewritten to use Graph.models objects. Strand support could come at the same time or as a separate step.
Haplonetwork.py should use Graph.Node.
- upstream/downstream compared to Paths
- Should allow copy number variation in a Node to work inside Haploblocker
What does downstream mean in a graph context?