Data_UG.yml

#
# GDC Docs - Config
#

site_name: GDC Docs
site_url: http://docs.gdc.cancer.gov
repo_url: https://github.com/NCI-GDC/gdc-docs
copyright: "© 2015-2016"
theme_dir: theme
pages:
- GDC Data:
  - Introduction: 'Data/Introduction.md'
  - GDC Data Model: 'Data/Data_Model/GDC_Data_Model.md'
  - Data Security: 'Data/Data_Security/Data_Security.md'
  - "File Format: MAF": 'Data/File_Formats/MAF_Format.md'
  - "File Format: VCF": 'Data/File_Formats/VCF_Format.md'
  - "Bioinformatics Pipeline: DNA-Seq Analysis": 'Data/Bioinformatics_Pipelines/DNA_Seq_Variant_Calling_Pipeline.md'
  - "Bioinformatics Pipeline: mRNA Analysis": 'Data/Bioinformatics_Pipelines/Expression_mRNA_Pipeline.md'
  - "Bioinformatics Pipeline: miRNA Analysis": 'Data/Bioinformatics_Pipelines/miRNA_Pipeline.md'
  - "Bioinformatics Pipeline: Copy Number Variation": 'Data/Bioinformatics_Pipelines/CNV_Pipeline.md'
  - "Bioinformatics Pipeline: Methylation Liftover": 'Data/Bioinformatics_Pipelines/Methylation_LO_Pipeline.md'
  - "Bioinformatics Pipeline: Protein Expression": 'Data/Bioinformatics_Pipelines/RPPA_intro.md'
  - Aligned Reads Summary Metrics: 'Data/Bioinformatics_Pipelines/Aligned_reads_summary_metrics.md'
  - Release Notes: 'Data/Release_Notes/Data_Release_Notes.md'
extra:
  project_root_dir: '/'
  project_org: 'GDC'
  project_description: 'GDC Docs'
  version: 1.0