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ml-bio-conda-nodeps.yml
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name: dc310
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1
- _openmp_mutex=4.5
- bzip2=1.0.8
- ca-certificates=2023.11.17
- ld_impl_linux-64=2.40
- libffi=3.4.2
- libgcc-ng=13.2.0
- libgomp=13.2.0
- libnsl=2.0.1
- libsqlite=3.44.2
- libuuid=2.38.1
- libzlib=1.2.13
- ncurses=6.4
- openssl=3.2.0
- pip=23.3.2
- python=3.10.0
- readline=8.2
- setuptools=68.2.2
- sqlite=3.44.2
- tk=8.6.13
- wheel=0.42.0
- xz=5.2.6
- pip:
- absl-py==2.0.0
- aiohttp==3.9.1
- aiosignal==1.3.1
- asttokens==2.4.1
- astunparse==1.6.3
- async-timeout==4.0.3
- attrs==23.1.0
- biopython==1.82
- cachetools==5.3.2
- certifi==2023.11.17
- charset-normalizer==3.3.2
- chex==0.1.85
- cloudpickle==3.0.0
- comm==0.2.0
- contourpy==1.2.0
- cycler==0.12.1
- debugpy==1.8.0
- decorator==5.1.1
- deepchem==2.7.2.dev20231227175133
- dgl==1.1.3+cu121
- dgllife==0.3.2
- dm-haiku==0.0.11
- dm-tree==0.1.8
- dnspython==2.4.2
- et-xmlfile==1.1.0
- etils==1.6.0
- exceptiongroup==1.2.0
- executing==2.0.1
- filelock==3.13.1
- flatbuffers==23.5.26
- flax==0.7.5
- fonttools==4.47.0
- frozenlist==1.4.1
- fsspec==2023.12.2
- future==0.18.3
- gast==0.5.4
- google-auth==2.25.2
- google-auth-oauthlib==1.2.0
- google-pasta==0.2.0
- grpcio==1.60.0
- h5py==3.10.0
- huggingface-hub==0.20.1
- hyperopt==0.2.7
- idna==3.6
- importlib-resources==6.1.1
- ipykernel==6.28.0
- ipython==8.19.0
- jax==0.4.23
- jaxlib==0.4.23
- jedi==0.19.1
- jinja2==3.1.2
- jmp==0.0.4
- joblib==1.3.2
- jupyter-client==8.6.0
- jupyter-core==5.6.0
- keras==2.15.0
- kiwisolver==1.4.5
- libclang==16.0.6
- lightning-utilities==0.10.0
- llvmlite==0.42.0
- lxml==5.1.0
- markdown==3.5.1
- markdown-it-py==3.0.0
- markupsafe==2.1.3
- matplotlib==3.8.2
- matplotlib-inline==0.1.6
- mdurl==0.1.2
- ml-dtypes==0.2.0
- mpmath==1.3.0
- msgpack==1.0.7
- multidict==6.0.4
- nest-asyncio==1.5.8
- networkx==3.2.1
- numba==0.59.0
- numpy==1.26.2
- nvidia-cublas-cu12==12.1.3.1
- nvidia-cuda-cupti-cu12==12.1.105
- nvidia-cuda-nvrtc-cu12==12.1.105
- nvidia-cuda-runtime-cu12==12.1.105
- nvidia-cudnn-cu12==8.9.2.26
- nvidia-cufft-cu12==11.0.2.54
- nvidia-curand-cu12==10.3.2.106
- nvidia-cusolver-cu12==11.4.5.107
- nvidia-cusparse-cu12==12.1.0.106
- nvidia-nccl-cu12==2.18.1
- nvidia-nvjitlink-cu12==12.3.101
- nvidia-nvtx-cu12==12.1.105
- oauthlib==3.2.2
- openpyxl==3.1.2
- opentsne==1.0.1
- opt-einsum==3.3.0
- optax==0.1.7
- orbax-checkpoint==0.4.4
- packaging==23.2
- pandas==2.2.0rc0
- parso==0.8.3
- pexpect==4.9.0
- pillow==10.1.0
- platformdirs==4.1.0
- prompt-toolkit==3.0.43
- protobuf==4.23.4
- psutil==5.9.7
- ptyprocess==0.7.0
- pure-eval==0.2.2
- py4j==0.10.9.7
- pyasn1==0.5.1
- pyasn1-modules==0.3.0
- pyg-lib==0.3.1+pt21cu121
- pygments==2.17.2
- pymongo==4.6.1
- pynndescent==0.5.11
- pyparsing==3.1.1
- python-box==7.1.1
- python-dateutil==2.8.2
- pytorch-lightning==2.1.3
- pytz==2023.3.post1
- pyyaml==6.0.1
- pyzmq==25.1.2
- rdkit==2023.9.3
- regex==2023.12.25
- requests==2.31.0
- requests-oauthlib==1.3.1
- rich==13.7.0
- rsa==4.9
- safetensors==0.4.1
- scikit-learn==1.4.0rc1
- scipy==1.12.0rc1
- seaborn==0.13.0
- six==1.16.0
- stack-data==0.6.3
- sympy==1.12
- tabulate==0.9.0
- tensorboard==2.15.1
- tensorboard-data-server==0.7.2
- tensorflow==2.15.0.post1
- tensorflow-addons==0.23.0
- tensorflow-estimator==2.15.0
- tensorflow-io-gcs-filesystem==0.35.0
- tensorflow-probability==0.23.0
- tensorstore==0.1.45
- termcolor==2.4.0
- threadpoolctl==3.2.0
- tokenizers==0.15.0
- toolz==0.12.0
- torch==2.1.2
- torch-cluster==1.6.3+pt21cu121
- torch-geometric==2.4.0
- torch-scatter==2.1.2+pt21cu121
- torch-sparse==0.6.18+pt21cu121
- torch-spline-conv==1.2.2+pt21cu121
- torchmetrics==1.2.1
- torchvision==0.16.2
- tornado==6.4
- tqdm==4.66.1
- traitlets==5.14.0
- transformers==4.36.2
- triton==2.1.0
- typeguard==2.13.3
- typing-extensions==4.9.0
- tzdata==2023.3
- umap==0.1.1
- umap-learn==0.5.5
- urllib3==2.1.0
- wcwidth==0.2.12
- werkzeug==3.0.1
- wrapt==1.14.1
- yarl==1.9.4
- zipp==3.17.0
prefix: /opt/miniconda3/envs/dc310