Repetitive circular DNA guideline #108
Description
Hi, I would like to ask what parameters, we should take into account when detecting repetitive circular DNA. The generated bed file does not have a defined number for the split_reads column (.) and does not have a defined value in column 11 coverage_continuity (NA). Therefore, I would like to ask if default values to filter the output of circle-map would be appropiate (ex: score >50) or other aspects should be taken into consideration.