Remove numba backend #236
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| name: run_tests | |
| on: | |
| pull_request: | |
| push: | |
| branches: [main] | |
| # Cancels all previous workflow runs for pull requests that have not completed. | |
| concurrency: | |
| # The concurrency group contains the workflow name and the branch name for pull requests | |
| # or the commit hash for any other events. | |
| group: ${{ github.workflow }}-${{ github.event_name == 'pull_request' && github.head_ref || github.sha }} | |
| cancel-in-progress: true | |
| jobs: | |
| test: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - subset-name: "Steady State Tests" | |
| os: ubuntu-latest | |
| python-version: "3.12" | |
| test-subset: "tests/model/test_steady_state.py tests/model/test_model.py::test_steady_state" | |
| test-marker: "" | |
| - subset-name: "Numerical Steady State Tests" | |
| os: ubuntu-latest | |
| python-version: "3.12" | |
| test-subset: "tests/model/test_model.py::test_numerical_steady_state tests/model/test_model.py::test_numerical_steady_state_with_calibrated_params tests/model/test_model.py::test_partially_analytical_steady_state" | |
| test-marker: "" | |
| - subset-name: "Perturbation and Statespace Tests" | |
| os: ubuntu-latest | |
| python-version: "3.12" | |
| test-subset: "tests/model/test_perturbation.py tests/model/test_statespace.py" | |
| test-marker: "" | |
| - subset-name: "Other Model Tests" | |
| os: ubuntu-latest | |
| python-version: "3.12" | |
| test-subset: "tests/model --ignore=tests/model/test_steady_state.py --ignore=tests/model/test_statespace.py --ignore=tests/model/test_perturbation.py --deselect tests/model/test_model.py::test_numerical_steady_state --deselect tests/model/test_model.py::test_numerical_steady_state_with_calibrated_params --deselect tests/model/test_model.py::test_partially_analytical_steady_state" | |
| test-marker: "" | |
| - subset-name: "Other Tests" | |
| os: ubuntu-latest | |
| python-version: "3.12" | |
| test-subset: "tests/ --ignore=tests/model" | |
| test-marker: "" | |
| - subset-name: "Windows Test Model" | |
| os: windows-latest | |
| python-version: "3.13" | |
| test-subset: "tests/model --ignore=tests/model/test_steady_state.py --ignore=tests/model/test_statespace.py --ignore=tests/model/test_build.py --deselect tests/model/test_model.py::test_steady_state --deselect tests/model/test_model.py::test_numerical_steady_state --deselect tests/model/test_model.py::test_partially_analytical_steady_state --deselect tests/model/test_model.py::test_all_backends_agree_on_functions --deselect tests/model/test_model.py::test_scipy_wrapped_functions_agree --deselect tests/model/test_model.py::test_all_backends_agree_on_parameters --deselect tests/models/test_model.py::test_simulate" | |
| test-marker: "not include_nk" | |
| - subset-name: "Windows Other Tests" | |
| os: windows-latest | |
| python-version: "3.13" | |
| test-subset: "tests/ --ignore=tests/model" | |
| test-marker: "not include_nk" | |
| name: ${{ matrix.subset-name }} (${{ matrix.os }} Python ${{ matrix.python-version }}) | |
| runs-on: ${{ matrix.os }} | |
| env: | |
| TEST_SUBSET: ${{ matrix.test-subset }} | |
| TEST_MARKER: ${{ matrix.test-marker }} | |
| defaults: | |
| run: | |
| shell: bash -leo pipefail {0} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: conda_envs/geconpy_test.yml | |
| create-args: >- | |
| python=${{matrix.python-version}} | |
| environment-name: geconpy-test | |
| init-shell: bash | |
| cache-environment: true | |
| - name: Install current branch | |
| run: | | |
| pip install -e . | |
| python --version | |
| - name: Create matrix id | |
| id: matrix-id | |
| env: | |
| MATRIX_CONTEXT: ${{ toJson(matrix) }} | |
| run: | | |
| echo $MATRIX_CONTEXT | |
| export MATRIX_ID=`echo $MATRIX_CONTEXT | sha256sum | cut -c 1-32` | |
| echo $MATRIX_ID | |
| echo "id=$MATRIX_ID" >> $GITHUB_OUTPUT | |
| - name: Run tests | |
| run: | | |
| python -m pytest -vv --cache-clear --cov=gEconpy --cov-report=xml:coverage/coverage-${MATRIX_ID}.xml --no-cov-on-fail --cov-report term $TEST_SUBSET -m "$TEST_MARKER" --durations=50 | |
| env: | |
| MATRIX_ID: ${{ steps.matrix-id.outputs.id }} | |
| - name: Upload coverage file | |
| uses: actions/upload-artifact@v4 | |
| with: | |
| name: coverage-${{ steps.matrix-id.outputs.id }} | |
| path: coverage/coverage-${{ steps.matrix-id.outputs.id }}.xml | |
| all-checks: | |
| if: ${{ always() }} | |
| runs-on: ubuntu-latest | |
| name: "All tests" | |
| needs: [test] | |
| steps: | |
| - name: Check build matrix status | |
| if: ${{ needs.test.result != 'success' }} | |
| run: exit 1 | |
| upload-coverage: | |
| runs-on: ubuntu-latest | |
| name: "Upload coverage" | |
| needs: [all-checks] | |
| if: ${{ needs.all-checks.result == 'success' }} | |
| steps: | |
| - uses: actions/checkout@v4 | |
| with: | |
| persist-credentials: false | |
| - name: Set up Python | |
| uses: actions/setup-python@v5 | |
| with: | |
| python-version: "3.13" | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install -U coverage>=5.1 coveralls | |
| - name: Download coverage file | |
| uses: actions/download-artifact@v4 | |
| with: | |
| pattern: coverage-* | |
| path: coverage | |
| merge-multiple: true | |
| - name: Upload coverage to Codecov | |
| uses: codecov/codecov-action@v5 | |
| with: | |
| directory: ./coverage/ | |
| fail_ci_if_error: true | |
| token: ${{ secrets.CODECOV_TOKEN }} |