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Question about integrating unpaired data

Status: Open.

#402 In scverse/SnapATAC2;

· huziouziou opened on Jun 22, 2025

Feature request: Support for custom motif enrichment analysis

enhancement ✨New feature or requestNew feature or request

Status: Open.

#401 In scverse/SnapATAC2;

· AmosFong1 opened on Jun 14, 2025

New version of cellranger-atac breaks frag size distr calculation.

enhancement ✨New feature or requestNew feature or request

Status: Open.

#400 In scverse/SnapATAC2;

· joseverdezoto opened on Jun 12, 2025

ex.export_coverage fails with some probloms

Status: Open.

#398 In scverse/SnapATAC2;

· RaFenglei opened on May 23, 2025

custom reference genome and annotation support

Status: Open.

#394 In scverse/SnapATAC2;

· sbgonenc opened on May 2, 2025

Using SCENIC+ with clustered and annotated anndataset

Status: Open.

#393 In scverse/SnapATAC2;

· ananyakohli17 opened on Apr 3, 2025

Is that possible to run diff_test in parallel?

Status: Open.

#392 In scverse/SnapATAC2;

· beyondpie opened on Apr 2, 2025

<code>file</code> parameter in snap.pp.import_fragments can not be omitted.

Status: Open.

#391 In scverse/SnapATAC2;

· GilbertHan1011 opened on Mar 21, 2025

Macs3 runs out of memory due to multiprocessing when run from a python script.

Status: Open.

#390 In scverse/SnapATAC2;

· Ethan-Earlie opened on Mar 18, 2025

Memory allocation error (?) when running snap.pp.import_data

Status: Open.

#389 In scverse/SnapATAC2;

· marissaco opened on Mar 17, 2025

guarddog detected repository_integrity_mismatch

Status: Open.

#388 In scverse/SnapATAC2;

· aowenson-imm opened on Mar 17, 2025

Nan error in RNA-ATAC integration

Status: Open.

#381 In scverse/SnapATAC2;

· HOKYOUNGWWW opened on Feb 27, 2025