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.jenkins.sh
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.jenkins.sh
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#!/usr/bin/env bash
# Important environment variables:
#
# WORKSPACE: path to the base WORKSPACE. This script assumes that there
# are 2 available subdirectories: pyomo (the pyomo source checkout
# and pyomo-model-libraries
# (the checkout of the additional model libraries repo). It will
# create two additional directories within WORKSPACE: python (a
# virtualenv) and config (the local Pyomo configuration/cache
# directory)
#
# CATEGORY: the category to pass to pytest
#
# TEST_SUITES: Paths (module or directory) to be passed to nosetests to
# run. (defaults to "pyomo '$WORKSPACE/pyomo-model-libraries'")
#
# SLIM: If nonempty, then the virtualenv will only have pip, setuptools,
# and wheel installed. Otherwise the virtualenv will inherit the
# system site-packages.
#
# CODECOV_TOKEN: the token to use when uploading results to codecov.io
#
# CODECOV_ARGS: additional arguments to pass to the codecov uploader
# (e.g., to support SSL certificates)
#
# DISABLE_COVERAGE: if nonempty, then coverage analysis is disabled
#
# PYOMO_SETUP_ARGS: passed to the 'python setup.py develop' command
# (e.g., to specify --with-cython)
#
# PYOMO_DOWNLOAD_ARGS: passed to the 'pyomo download-extensions' command
# (e.g., to set up local SSL certificate authorities)
#
# PYTEST_EXTRA_ARGS: passed to the 'pytest' command
# (e.g., to add extra pytest options like '--collect-only')
#
if test -z "$WORKSPACE"; then
export WORKSPACE=`pwd`
fi
if test -z "$TEST_SUITES"; then
export TEST_SUITES="${WORKSPACE}/pyomo/pyomo ${WORKSPACE}/pyomo-model-libraries ${WORKSPACE}/pyomo/examples/pyomobook"
fi
if test -z "$SLIM"; then
export VENV_SYSTEM_PACKAGES='--system-site-packages'
fi
if test ! -z "$CATEGORY"; then
export PY_CAT="-m $CATEGORY"
fi
if test "$WORKSPACE" != "`pwd`"; then
echo "ERROR: pwd is not WORKSPACE"
echo " pwd= `pwd`"
echo " WORKSPACE= $WORKSPACE"
exit 1
fi
MODE="$1"
if test -z "$MODE" -o "$MODE" == setup; then
# Clean old PYC files and remove any previous virtualenv
echo "#"
echo "# Removing python virtual environment"
echo "#"
rm -rf ${WORKSPACE}/python
echo "#"
echo "# Cleaning out old .pyc and cython files"
echo "#"
for EXT in pyc pyx pyd so dylib dll; do
find ${WORKSPACE}/pyomo -name \*.$EXT -delete
done
# Set up the local lpython
echo ""
echo "#"
echo "# Setting up virtual environment"
echo "#"
virtualenv python $VENV_SYSTEM_PACKAGES --clear
source python/bin/activate
# Because modules set the PYTHONPATH, we need to make sure that the
# virtualenv appears first
LOCAL_SITE_PACKAGES=`python -c "from distutils.sysconfig import get_python_lib; print(get_python_lib())"`
export PYTHONPATH="$LOCAL_SITE_PACKAGES:$PYTHONPATH"
# Set up Pyomo checkouts
echo ""
# configure the Pyomo configuration directory
echo "#"
echo "# Installing pyomo modules"
echo "#"
pushd "$WORKSPACE/pyutilib" || echo "PyUtilib not found"
python setup.py develop || echo "PyUtilib failed - skipping."
popd
pushd "$WORKSPACE/pyomo" || exit 1
python setup.py develop $PYOMO_SETUP_ARGS || exit 1
popd
#
# DO NOT install pyomo-model-libraries
#
# Set up coverage tracking for subprocesses
if test -z "$DISABLE_COVERAGE"; then
# Clean up old coverage files
rm -fv ${WORKSPACE}/pyomo/.coverage ${WORKSPACE}/pyomo/.coverage.*
# Set up coverage for this build
export COVERAGE_PROCESS_START=${WORKSPACE}/coveragerc
cp ${WORKSPACE}/pyomo/.coveragerc ${COVERAGE_PROCESS_START}
echo "data_file=${WORKSPACE}/pyomo/.coverage" \
>> ${COVERAGE_PROCESS_START}
echo 'import coverage; coverage.process_startup()' \
> "${LOCAL_SITE_PACKAGES}/run_coverage_at_startup.pth"
fi
# Move into the pyomo directory
pushd ${WORKSPACE}/pyomo || exit 1
# Set a local Pyomo configuration dir within this workspace
export PYOMO_CONFIG_DIR="${WORKSPACE}/config"
echo ""
echo "PYOMO_CONFIG_DIR=$PYOMO_CONFIG_DIR"
echo ""
# Use Pyomo to download & compile binary extensions
i=0
while /bin/true; do
i=$[$i+1]
echo "Downloading pyomo extensions (attempt $i)"
pyomo download-extensions $PYOMO_DOWNLOAD_ARGS
if test $? == 0; then
break
elif test $i -ge 3; then
exit 1
fi
DELAY=$(( RANDOM % 30 + 15))
echo "Pausing $DELAY seconds before re-attempting download"
sleep $DELAY
done
pyomo build-extensions || exit 1
# Print useful version information
echo ""
echo "#"
echo "# Package information:"
echo "#"
python --version
pip --version
pip list
echo "#"
echo "# Installed programs:"
echo "#"
gjh -v || echo "GJH not found"
glpsol -v || echo "GLPK not found"
cbc -quit || echo "CBC not found"
cplex -c quit || echo "CPLEX not found"
gurobi_cl --version || echo "GUROBI not found"
ipopt -v || echo "IPOPT not found"
gams || echo "GAMS not found"
# Exit ${WORKSPACE}/pyomo
popd
fi
if test -z "$MODE" -o "$MODE" == test; then
# Copy conftest.py into every requested test suite that is NOT
# within ${WORKSPACE}/pyomo
for TEST in $TEST_SUITES; do
if [[ "$TEST" != *"${WORKSPACE}/pyomo/"* ]]; then
cp ${WORKSPACE}/conftest.py $TEST
fi;
done
rm ${WORKSPACE}/conftest.py
echo ""
echo "#"
echo "# Running Pyomo tests"
echo "#"
python -m pytest -v \
-W ignore::Warning \
--junitxml="TEST-pyomo.xml" \
$PY_CAT $TEST_SUITES $PYTEST_EXTRA_ARGS
# Combine the coverage results and upload
if test -z "$DISABLE_COVERAGE"; then
# Enter ${WORKSPACE}/pyomo for coverage Processing
pushd ${WORKSPACE}/pyomo || exit 1
echo ""
echo "#"
echo "# Processing coverage information in "`pwd`
echo "#"
#
# Note, that the PWD should still be $WORKSPACE/pyomo
#
coverage combine || exit 1
coverage report -i
export OS=`uname`
if test -z "$CODECOV_TOKEN"; then
coverage xml
else
CODECOV_JOB_NAME=`echo ${JOB_NAME} | sed -r 's/^(.*autotest_)?Pyomo_([^\/]+).*/\2/'`.$BUILD_NUMBER.$python
i=0
while /bin/true; do
i=$[$i+1]
echo "Uploading coverage to codecov (attempt $i)"
codecov -X gcovcodecov -X gcov -X s3 --no-color \
-t $CODECOV_TOKEN --root `pwd` -e OS,python \
--name $CODECOV_JOB_NAME $CODECOV_ARGS \
| tee .cover.upload
if test $? == 0 -a `grep -i error .cover.upload \
| grep -v branch= | wc -l` -eq 0; then
break
elif test $i -ge 4; then
exit 1
fi
DELAY=$(( RANDOM % 30 + 15))
echo "Pausing $DELAY seconds before re-attempting upload"
sleep $DELAY
done
fi
rm .coverage
# Exit ${WORKSPACE}/pyomo
popd
fi
fi