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🔨 added file_type created from reannotation
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Diff for: STUDY_CONFIGS/pbta_all_case_meta_config.json

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@@ -221,17 +221,17 @@
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"manifests": {
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"cbtn": {
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"table": "bix_genomics_file.sd_bhjxbdqk-genomics_file_manifest",
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","consensus_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"out_file": "cbtn_genomics_file_manifest.txt"
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},
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"x01": {
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"table": "bix_genomics_file.sd_bhjxbdqk_x01-genomics_file_manifest",
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","consensus_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"out_file": "x01_genomics_file_manifest.txt"
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},
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"cbtn_extra": {
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"table": "bix_genomics_file.sd_bhjxbdqk_x01_extra-genomics_file_manifest",
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"file_type": ["RSEM_gene","annofuse_filtered_fusions_tsv","annotated_public_outputs","consensus_public_outputs","ctrlfreec_pval","ctrlfreec_info","ctrlfreec_bam_seg"],
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"out_file": "cbtn_extra_genomics_file_manifest.txt"
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},
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"pnoc": {

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