add python 3.11 support (#77)

Author: kip-hart

.github/workflows/python_package.yaml

@@ -9,7 +9,7 @@ jobs:
     runs-on: ${{ matrix.os }}
     strategy:
       matrix:
-        python-version: [3.8, 3.9, '3.10']
+        python-version: [3.8, 3.9, '3.10', '3.11']
         os: ['ubuntu-latest', 'macos-latest', 'windows-latest']
 
     steps:

CHANGELOG.rst

@@ -6,6 +6,17 @@ All notable changes to this project will be documented in this file.
 The format is based on `Keep a Changelog`_,
 and this project adheres to `Semantic Versioning`_.
 
+`1.5.8`_ - 2023-08-25
+--------------------------
+Added
+'''''
+- Support for Python 3.11
+
+Fixed
+'''''''
+- Errors associated with using keyword arguments in ``plt.gca()`` deprecated in matplotlib 3.4.
+
+
 `1.5.7`_ - 2023-08-06
 --------------------------
 Fixed
@@ -300,7 +311,8 @@ Added
 
 .. LINKS
 
-.. _`Unreleased`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.7...HEAD
+.. _`Unreleased`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.8...HEAD
+.. _`1.5.8`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.7...v1.5.8
 .. _`1.5.7`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.6...v1.5.7
 .. _`1.5.6`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.5...v1.5.6
 .. _`1.5.5`: https://github.com/kip-hart/MicroStructPy/compare/v1.5.4...v1.5.5

README.rst

@@ -152,7 +152,7 @@ generator in Python, *SoftwareX*, 12 (2020), 100595.
 (`BibTeX <https://github.com/kip-hart/MicroStructPy/raw/master/docs/publications/swx2020.bib>`__)
 (`DOI <https://doi.org/10.1016/j.softx.2020.100595>`__)
 
-The news article `AE Doctoral Student Kenneth A. Hart Presents MicroStructPy to the World <https://www.ae.gatech.edu/news/2020/07/ae-doctoral-student-kenneth-hart-presents-microstructpy-world>`__,
+The news article `AE Doctoral Student Kenneth A. Hart Presents MicroStructPy to the World <https://www.ae.gatech.edu/news/2020/07/kip-hart>`__,
 written by the School of Aerospace Engineering at Georgia Tech,
 describes MicroStructPy for a general audience.
 
@@ -177,17 +177,17 @@ advised by Prof. Julian Rimoli.
 
 .. LINKS
 
-.. _`Contributing Guidelines`: https://github.com/kip-hart/MicroStructPy/blob/dev/.github/CONTRIBUTING.md
+.. _`Contributing Guidelines`: https://github.com/kip-hart/MicroStructPy/blob/master/.github/CONTRIBUTING.md
 
 .. external-images
 
-.. |l-github| image:: https://api.iconify.design/octicon:mark-github.svg?color=black0&inline=true&height=16
+.. |l-github| image:: https://github.com/kip-hart/MicroStructPy/raw/master/docs/source/_static/github.svg
     :alt: GitHub
 
-.. |l-rtd| image:: https://api.iconify.design/simple-icons:readthedocs.svg?color=black&inline=true&height=16
+.. |l-rtd| image:: https://github.com/kip-hart/MicroStructPy/raw/master/docs/source/_static/rtd.svg
     :alt: ReadTheDocs
 
-.. |l-pypi| image:: https://api.iconify.design/mdi:cube-outline.svg?color=black&inline=true&height=16
+.. |l-pypi| image:: https://github.com/kip-hart/MicroStructPy/raw/master/docs/source/_static/pypi.svg
     :alt: PyPI
 
 

requirements.txt

@@ -5,7 +5,7 @@ pygmsh==7.1.17
 MeshPy==2018.2.1
 numpy==1.24.4
 pyquaternion==0.9.5
-pyvoro-mmalahe==1.3.3
+pyvoro-mmalahe==1.3.4
 scipy==1.10.1
 xmltodict==0.12.0
 tox==3.14.0

setup.py

@@ -60,6 +60,7 @@ def find_version(*fname):
         'Programming Language :: Python :: 3.8',
         'Programming Language :: Python :: 3.9',
         'Programming Language :: Python :: 3.10',
+        'Programming Language :: Python :: 3.11',
         'Topic :: Scientific/Engineering',
         'Topic :: Scientific/Engineering :: Mathematics',
         'Topic :: Scientific/Engineering :: Physics'
@@ -84,7 +85,7 @@ def find_version(*fname):
         'numpy>=1.13.0',
         'pygmsh>=7.0.2',
         'pyquaternion',
-        'pyvoro-mmalahe',  # install issue with pyvoro
+        'pyvoro-mmalahe>=1.3.4',  # install issue with pyvoro
         'scipy',
         'xmltodict'
     ],

src/microstructpy/__init__.py

@@ -4,4 +4,4 @@
 import microstructpy.seeding
 import microstructpy.verification
 
-__version__ = '1.5.7'
+__version__ = '1.5.8'

src/microstructpy/seeding/seedlist.py

@@ -670,10 +670,10 @@ def plot_breakdown(self, index_by='seed', material=[], loc=0, **kwargs):
                     seed_args[seed_num][key] = val
 
         n = self[0].geometry.n_dim
-        if n == 2:
+        if n == 2 or plt.gca().get_axes():
             ax = plt.gca()
         else:
-            ax = plt.gcf().gca(projection=Axes3D.name)
+            ax = plt.gcf().add_subplot(projection=Axes3D.name)
         n_obj = _misc.ax_objects(ax)
         if n_obj > 0:
             xlim = ax.get_xlim()
@@ -1072,10 +1072,10 @@ def _plt_args(seeds, index_by, kwargs):
 
 
 def _get_axes(n):
-    if n == 2:
+    if n == 2 or plt.gcf().get_axes():
         ax = plt.gca()
     else:
-        ax = plt.gcf().gca(projection=Axes3D.name)
+        ax = plt.gcf().add_subplot(projection=Axes3D.name)
     n_obj = _misc.ax_objects(ax)
     if n_obj > 0:
         xlim = ax.get_xlim()