Model Zoo

Researchers develop DragoNN models for a wide range of genomics problems. To help share these models, we introduce the Model Zoo:

• Standard format for packaging DragoNN model info.
• Tools to upload and download trained DragoNN models.

To acquire a model:

1. download the model gist by ./scripts/download_model_from_gist.sh <gist_id> <dirname> to load the model metadata, architecture, solver configuration, and so on. (<dirname> is optional and defaults to ./models).
2. download the model weights by ./scripts/download_model_binary.py <model_dir> where <model_dir> is the gist directory from the first step.

Example models

• Simple motif detection model: model generated by ./examples/simple_motif_detection.py